Professor Daniel Bradley
Professor, Genetics
Biography
Dan Bradley was brought up on a Northern Irish farm and after a degree in Genetics from Cambridge University and PhD in medical genetics from Trinity College Dublin he started to work on the genetics of each species present on that farm, including Irish humans, and has done for over 30 years. With his colleagues he has combined analysis of ancient and modern cattle to inform on the origins of these and other domesticates and pioneered the molecular genetic analysis of Irish populations. He holds a Personal Chair in Population Genetics in Trinity and was awarded the 2020 Royal Irish Academy Gold Medal in the Life Sciences
Publications and Further Research Outputs
Peer-Reviewed Publications
Said I. Ng'ang'a, James A. Ward, Stephen J. Rossiter, Chris G. Faulkes, Katia Bougiouri, Gillian P. McHugo, F.P.D. Cotterill, Atunga Nyachieo, Olaf Thalmann, Ivica Medugorac, S Krebs, Tad S. Sonstegard, Olivier Hanotte, Daniel G. Bradley, Gary Vaughan-Smith, David E. MacHugh, Laurent Frantz, Accurate imputation of African cattle genomes using a diverse reference panel, BMC Genomics, 27, (1), 2026
Charllotte Blacka, Clare Rainsford, Ciarán G. O"Connor, Victoria E. Mullin, Daniel G. Bradley, Peter Halkon, Jackie A. Mosely, Kirsty Penkman, Jessica Hendy, Integration of age-at-death and novel peptide sex estimation reveals cattle culling practices at Yorkshire Iron Age shrine site, Journal of Archaeological Science, 190, 2026, p106575 - 106575, p106575-106575
Anna Spyrou, Andreas C. Dimitriou, Valeria Mattiangeli, Deborah Diquelou, Daniel G. Bradley, Victoria E. Mullin, Georgia Hadjipavlou, A multidisciplinary framework for adding value to the indigenous cattle breed of Cyprus, Genetic Resources, 7, (13), 2026, p118 - 128, p118-128
Jaime Lira Garrido, Gaétan Tressières, Loreleï Chauvey, Stéphanie Schiavinato, Laure Tonasso"Calvière, Andaine Seguin"Orlando, John Southon, Beth Shapiro, Clément P. Bataille, Julie Birgel, Stefanie Wagner, Naveed Khan, Xuexue Liu, José María Rodanés Vicente, Jesús Vicente Picazo Millán, Josep Giralt, Natàlia Alonso, Isidro Aguilera, Adriano Orsingher, Angela Trentacoste, Xavier Payà, Marta Morán, María Pilar Iborra Eres, Silvia Albizuri, Sílvia Valenzuela, Imma Mestres Santandreu, Montserrat Durán i Caixal, Jordí Principal, Jordi Huguet, Xavier Esteve, Mireia Pedro Pasqual, Nohemi Sala, Adrián Pablos, Patricia Martín, Josep María Vergès, Rodrigo Portero, Pablo Arias Cabal, Roberto Ontañón Peredo, Cleia Detry, Cristina Lu""s, João Luís Cardoso, Aren M. Maeir, Maria João Valente, Elena Grau, Vicent Estall I Poles, Joaquín Alfonso Llorens, Ana Miguélez González, Armelle Gardeisen, Michele Cupitò, U. Tecchiati, Daniel G. Bradley, Liora Kolska Horwitz, Esther Rodríguez González, Ariadna Nieto"Espinet, Pere Rosselló Bover, Rosa Ruiz Entrecanales, Ignasi Garcés Estallo, Joaquín Jiménez Fragoso, Sebastián Celestino, Ludovic Orlando, The genomic history of Iberian horses since the last Ice Age, Nature Communications, 16, (1), 2025, p7098 - 7098, p7098-7098
Gonzalo Oteo"García, Marina Silva, M. George B. Foody, Bobby Yau, Alessandro Fichera, Llorenç Alapont, Pierre Justeau, Simão Rodrigues, Rita Monteiro, Francesca Gandini, María Luisa Rovira Gomar, Albert Ribera i Lacomba, Josep Pascual Beneyto, Valeria Mattiangeli, Daniel G. Bradley, Ceiridwen J. Edwards, Maria Pala, Martin Richards, Medieval genomes from eastern Iberia illuminate the role of Morisco mass deportations in dismantling a long-standing genetic bridge with North Africa, Genome biology, 26, (1), 2025, p108 - 108, p108-108
Kuldeep D. More, Petra Raji" Šikanji", Marcel Buri", Tajana Trbojevi" Vuki"evi", Nadir Álvarez, Jean"Christophe Castel, Myriam Boudadi"Maligne, Bastiaan Star, Julian Post-Melbye, Christian Løchsen Rødsrud, David W. G. Stanton, Sophy Charlton, Victoria E. Mullin, Kevin G. Daly, Nohemi Sala Burgos, Adrián Pablos, Love Dalén, Daniel G. Bradley, Laurent Frantz, Greger Larson, Ludovic Orlando, Ophélie Lebrasseur, Jaime Lira Garrido, Andaine Seguin"Orlando, Emmanuel Discamps, Oscar Estrada, Laure Tonasso"Calvière, Loreleï Chauvey, Gaétan Tressières, Stéphanie Schiavinato, Morgane Gibert, Horacio Padula, Horacio Chiavazza, Pablo Marcelo Fernández, Nicolás Guardia, Caroline Borges, Stéphane Bertani, Juan Contreras"Mancilla, Diana Allccarima"Crisóstomo, Miguel Fhon, Éric Barrey, Léa Charliquart, Émilie Robbe, Thibault de Noblet, Rinat Zhumatayev, Samat Shakenov, Emmanuelle Vila, Rémi Berthon, Marjan Mashkour, Roya Khazaeli, A. Nikgoftar, Ali A. Vahdati, ". ". """""""", Jean"Luc Houle, Jamsranjav Bayarsaikhan, Jaros"aw Wilczy"ski, Magdalena Moskal"del Hoyo, Marek Nowak, William Taylor, Adrian B"l""escu, Roxana Dobrescu, Norbert Benecke, Benjamin S. Arbuckle, Sharon R. Steadman, Gregory McMahon, Validating a Target"Enrichment Design for Capturing Uniparental Haplotypes in Ancient Domesticated Animals, Molecular Ecology Resources, 25, (7), 2025, pe14112 - e14112, pe14112-e14112
Kevin G. Daly, Victoria E. Mullin, Andrew J. Hare, Áine Halpin, Valeria Mattiangeli, Matthew D. Teasdale, Conor Rossi, Sheila Geiger, Stefan Krebs, Ivica Medugorac, Edson Sandoval-Castellanos, Mihriban Özbasaran, Günes Duru, Sevil Gülcür, Nadja Pöllath, Matthew Collins, Laurent Frantz, Emmanuelle Vila, Peter Zidarov, Simon Stoddart, Bazartseren Boldgiv, Ludovic Orlando, Mike Parker Pearson, Jacqui Mullville, Igor V. Askeyev, Arthur O. Askeyev, Oleg V. Askeyev, Dilyara N. Shaymuratova, Youri Van den Hurk, Andrea Zeeb-Lanz, Rose-Marie Arbogast, Helmut Hemmer, Hossein Davoudi, Sarieh Amiri, Sanaz Beizaee Doost, Delphine Decruyenaere, Homa Fathi, Roya Khazaeli, Yousef Hassanzadeh, Alireza Sardari, Johanna Lhuillier, Mostafa Abdolahi, Geoffrey D. Summers, Catherine Marro, Veli Bahshaliyev, Rémi Berthon, Canan Çakirlar, Norbert Benecke, Amelie Scheu, Joachim Burger, Eberhard Sauer, Liora Kolska Horwitz, Benjamin Arbuckle, Hijlke Buitenhuis, Lionel Gourichon, Jelena Bulatovic, Terry O'Connor, David Orton, Mindia Jalabadze, Stephen Rhodes, Michael Chazan, Vecihi Özkaya, Melinda Zeder, Levent Atici, Marjan Mashkour, Joris Peters, Daniel G. Bradley, Ancient genomics and the origin, dispersal, and development of domestic sheep, Science, 2025
Lara M Cassidy, Miles Russell, Martin Smith, Gabrielle Delbarre, Paul Cheetham, Harry Manley, Valeria Mattiangeli, Emily M Breslin, Iseult Jackson, Maeve McCann, Harry Little, Ciarán G O"Connor, Beth Heaslip, Daniel Lawson, Phillip Endicott, Daniel G Bradley, Continental influx and pervasive matrilocality in Iron Age Britain, Nature, 637, 2025, p1136 - 1142
Cassidy LM, Russell M, Smith M, Delbarre G, Cheetham P, Manley H, Mattiangeli V, Breslin EM, Jackson I, McCann M, Little H, O'Connor CG, Heaslip B, Lawson D, Endicott P, Bradley DG., Continental influx and pervasive matrilocality in Iron Age Britain., Nature, 637, (8048), 2025, p1136-1142
R.P.M.A. Crooijmans, R. Gonzalez Prendes, Licia Colli, Marcello Del Corvo, Mario Barbato, Elisa Somenzi, Gwenola Tosser"Klopp, Gábor Mészáros, Paolo Ajmone"Marsan, Steffen Weigend, Barbara C. Wallner, Molly E. McCue, Ludovic Orlando, Daniel G. Bradley, S.J. Hiemstra, Dirkjan Schokker, Nathalie Peynot, Alessandra Stella, Gwendal Restoux, Martien A. M. Groenen, Michèle Tixier"Boichard,
Cooke N.P., Murray M., Cassidy L.M., Mattiangeli V., Okazaki K., Kasai K., Gakuhari T., Bradley D.G., Nakagome S., Genomic imputation of ancient Asian populations contrasts local adaptation in pre- and post-agricultural Japan, iScience, 27, (110050), 2024
Rossi C, Sinding MS, Mullin VE, Scheu A, Erven JAM, Verdugo MP, Daly KG, Ciucani MM, Mattiangeli V, Teasdale MD, Diquelou D, Manin A, Bangsgaard P, Collins M, Lord TC, Zeibert V, Zorzin R, Vinter M, Timmons Z, Kitchener AC, Street M, Haruda AF, Tabbada K, Larson G, Frantz LAF, Gehlen B, Alhaique F, Tagliacozzo A, Fornasiero M, Pandolfi L, Karastoyanova N, Sørensen L, Kiryushin K, Ekström J, Mostadius M, Grandal-d'Anglade A, Vidal-Gorosquieta A, Benecke N, Kropp C, Grushin SP, Gilbert MTP, Merts I, Merts V, Outram AK, Rosengren E, Kosintsev P, Sablin M, Tishkin AA, Makarewicz CA, Burger J, Bradley DG., The genomic natural history of the aurochs., Nature, 635, (8037), 2024, p136-141
Rui Martiniano, Marc Haber, Mohamed A. Almarri, Valeria Mattiangeli, Mirte C. M. Kuijpers, Bérénice Chamel, Emily M. Breslin, Judith Littleton, Salman Almahari, Fatima Aloraifi, Daniel G. Bradley, Pierre Lombard, Richard Durbin, Ancient genomes illuminate Eastern Arabian population history and adaptation against malaria, Cell Genomics, 4, (3), 2024, p100507 - 100507, p100507-100507
Bagnasco, G. and Marzullo, M. and Cattaneo, C. and Biehler-Gomez, L. and Mazzarelli, D. and Ricciardi, V. and MÃŒller, W. and Coppa, A. and McLaughlin, R. and Motta, L. and Prato, O. and Schmidt, F. and Gaveriaux, F. and Marras, G.B. and Millet, M.A. and Madgwick, R. and Ballantyne, R. and Makarewicz, C.A. and Trentacoste, A. and Reimer, P. and Mattiangeli, V. and Bradley, D.G. and Malone, C. and Esposito, C. and Breslin, E.M. and Stoddart, S., Bioarchaeology aids the cultural understanding of six characters in search of their agency (Tarquinia, ninthâ"seventh century BC, central Italy), Scientific Reports, 14, (1), 2024
Pablo Librado, Gaétan Tressières, Loreleï Chauvey, Antoine Fages, Naveed Ahmed Khan, Stéphanie Schiavinato, Laure Tonasso"Calvière, Mariya A. Kusliy, Charleen Gaunitz, Xuexue Liu, Stefanie Wagner, Clio Der Sarkissian, Andaine Seguin"Orlando, Aude Perdereau, Jean"Marc Aury, John Southon, Beth Shapiro, Olivier Bouchez, Cécile Donnadieu, Yvette Running Horse Collin, Kristian Murphy Gregersen, Mads Dengsø Jessen, Kirsten M. Christensen, Lone Claudi-Hansen, Mélanie Pruvost, Erich Pucher, Hrvoje Vuli", Mario Novak, Andrea Rimpf, Peter Turk, Simone Frizell Reiter, ". """", Christoph Schwall, Éric Barrey, Céline Robert, Christophe Degueurce, Liora Kolska Horwitz, Lutz Klassen, Uffe Lind Rasmussen, Jacob Kveiborg, Niels Nørkjær Johannsen, Daniel Makowiecki, Przemys"aw Makarowicz, Marcin Szeliga, Vasyl Ilchyshyn, Vitalii Rud, Jan Romaniszyn, Victoria E. Mullin, Marta Pereira Verdugo, Daniel G. Bradley, João Luís Cardoso, Maria João Valente, Miguel Telles Antunes, Carly Ameen, Richard M. Thomas, Arne Ludwig, Matilde Marzullo, Ornella Prato, Giovanna Bagnasco Gianni, U. Tecchiati, José Granado, Angela Schlumbaum, Sabine Deschler-Erb, Monika Schernig Mráz, Nicolas Boulbes, Armelle Gardeisen, Christian Mayer, Hans-Jürgen Döhle, Magdolna Vicze, ". ". """""""", René Kyselý, Lubomír Peške, Terry O"Connor, Elina Ananyevskaya, Irin" Shevnina, Andrey Logvin, Alexey Kovalev, Tumur-Ochir Iderkhangai, Mikhail Sablin, P. K. Dashkovskiy, Alexander S. Graphodatsky, I. Merts, """""" """", Aleksei Kasparov, Vladimir V. Pitulko, Vedat Onar, Aliye Öztan, Benjamin S. Arbuckle, Hugh McColl, Gabriel Renaud, Ruslan Khaskhanov, Sergey Demidenko, Anna Kadieva, Biyaslan Atabiev, Marie Sundqvist, Gabriella Lindgren, F. Javier López-Cachero, Silvia Albizuri, Tajana Trbojevi" Vuki"evi", Anita Rapan Papeša, Widespread horse-based mobility arose around 2200 bce in Eurasia, Nature, 631, (8022), 2024, p819 - 825, p819-825
Edson Sandoval"Castellanos, Andrew J. Hare, Audrey T. Lin, Evangelos A. Dimopoulos, Kevin G. Daly, S. Geiger, Victoria E. Mullin, Ingrid Wiechmann, Valeria Mattiangeli, Gesine Lühken, N. A. Zinovieva, Pet"r Zidarov, Canan Çak"rlar, Simon Stoddart, David Orton, Jelena Bulatovi", Marjan Mashkour, Eberhard Sauer, Liora Kolska Horwitz, Barbara Horejs, Levent At"c", Vecihi Özkaya, Jacqui Mullville, Mike Parker Pearson, Ingrid Mainland, Nick Card, Lisa Brown, Niall Sharples, David Griffiths, David Y. Allen, Benjamin S. Arbuckle, Jordan T. Abell, Güne" Duru, Susan M. Mentzer, Natalie D. Munro, Melis Üzdürüm, Sevil Gülçur, Hijlke Buitenhuis, ". ". """"""", Mary C. Stiner, Nadja Pöllath, Mihriban Özba"aran, Stefan Krebs, Joachim Bürger, Laurent Frantz, Ivica Me"ugorac, Daniel G. Bradley, Joris Peters, Ancient mitogenomes from Pre-Pottery Neolithic Central Anatolia and the effects of a Late Neolithic bottleneck in sheep ( Ovis aries ), Science Advances, 10, (15), 2024, peadj0954 - eadj0954, peadj0954-eadj0954
Niall P Cooke, Valeria Mattiangeli, Lara M Cassidy, Kenji Okazaki, Kenji Kasai, Daniel G Bradley, Takashi Gakuhari, Shigeki Nakagome, Genomic insights into a tripartite ancestry in the Southern Ryukyu Islands, Evolutionary Human Sciences, 5, 2023, pe23-
Cooke N.P., Mattiangeli V., Cassidy L.M., Okazaki K., Kasai K., Bradley D.G., Gakuhari T., Nakagome S., Genomic insights into a tripartite ancestry in the Southern Ryukyu Islands, Evolutionary Huma Sciences, 5, 2023, pe23-
Jackson I, Mattiangeli V, Cassidy LM, Murphy E, Bradley DG., Millennium-old pathogenic Mendelian mutation discovery for multiple osteochondromas from a Gaelic Medieval graveyard, Eur J Hum Genet, 2023
Katharina Dulias, M. George B. Foody, Pierre Justeau, Marina Silva, Rui Martiniano, Gonzalo Oteo"García, Alessandro Fichera, Simão Rodrigues, Francesca Gandini, Alison Meynert, Kevin Donnelly, Timothy J. Aitman, Andrew Chamberlain, Olivia Lelong, George R. Kozikowski, Dominic Powlesland, Clive Waddington, Valeria Mattiangeli, Daniel G. Bradley, Jaros"aw Bryk, Pedro Soares, James F. Wilson, Graeme Wilson, Hazel Moore, Maria Pala, Ceiridwen J. Edwards, Martin Richards, Timothy J. Aitman, Zosia Miedzybrodzka, Nicola Williams, Alison Meynert, Andrew V. Biankin, Javier Santoyo"López, Javier Santoyo-Lopez, Ancient DNA at the edge of the world: Continental immigration and the persistence of Neolithic male lineages in Bronze Age Orkney, Proceedings of the National Academy of Sciences, 119, (8), 2022
Ariano B, Mattiangeli V, Breslin EM, Parkinson EW, McLaughlin TR, Thompson JE, Power RK, Stock JT, Mercieca-Spiteri B, Stoddart S, Malone C, Gopalakrishnan S, Cassidy LM, Bradley DG., Ancient Maltese genomes and the genetic geography of Neolithic Europe, Current Biology, 2022
Johannes A. Lenstra, Isaäc J. Nijman, Benjamin D. Rosen, Philippe Bardou, Thomas Faraut, Tristan Cumer, Kevin G. Daly, Z. Zheng, Yudong Cai, Hojjat Asadollahpour, B. Ç"nar, Kul, Wen"Gen Zhang, G. E, A. Ayin, Meirat Bakhtin, Valentin-Adrian Bâlteanu, Diana Barfield, Hayley Baird, Beate Berger, Thor Blichfeldt, Geert Boink, S.R.A. Bugiwati, Zexi Cai, Seán Carolan, Emily L. Clark, Vlatka "ubri"-"urik, Muhammad Ihsan Andi Dagong, Tashi Dorji, Louise Drew, Jiazhong Guo, Jón Hallsteinn Hallsson, Simon Horvat, Juha Kantanen, Fuki Kawaguchi, Polat "azymbet, Negar Khayatzadeh, Namshin Kim, Manoj Kumar Shah, Yuying Liao, Amparo Martínez, Joseph S. Masangkay, Maho Masaoka, Roberto Mazza, John C. McEwan, Marco Milanesi, Faruque Md. Omar, Y. Nomura, Nadjet"Amina Ouchene"Khelifi, Filipe Pereira, Goutam Sahana, Shinji Sasazaki, A. Da Silva, Mojca Sim"i", Johann Sölkner, Alison Sutherland, J. Tigchelaar, H. Zhang, Paolo Ajmone"Marsan, Daniel G. Bradley, Licia Colli, Cord Drögemüller, Chuzhao Lei, Hideyuki Mannen, François Pompanon, Gwenola Tosser"Klopp, Yu Jiang, 208. Y-chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions, 2022, p886 - 889, p886-889
Jolijn A. M. Erven, Canan Çak"rlar, Daniel G. Bradley, D.C.M. Raemaekers, Ole Madsen, Imputation of Ancient Whole Genome Sus scrofa DNA Introduces Biases Toward Main Population Components in the Reference Panel, Frontiers in Genetics, 13, 2022, p872486 - 872486, p872486-872486
Isaäc J. Nijman, Benjamin D. Rosen, Philippe Bardou, Thomas Faraut, Tristan Cumer, Kevin Daly, Zhuqing Zheng, Yudong Cai, Hojjat Asadollahpour, Bengi Cinar-Kul, Weiyi Zhang, E Guangxin, A Ayin, Hayley Baird, Meirat Bakhtin, Valentin A. Bâlteanu, Diana Barfield, Beate Berger, Thor Blichfeldt, Geert Boink, Sri R. A. Bugiwati, Zexi Cai, Seán Carolan, Emily L. Clark, Vladka Cubri" Curik, Muhammad Ihsan Andi Dagong, Tashi Dorji, Louise Drew, Jiazhong Guo, Jón Hallsteinn Hallsson, Simon Horvat, Juha Kantanen, Fuki Kawaguchi, Polat "azymbet, Negar Khayatzadeh, Namshin Kim, Manoj Kumar Shah, Yuying Liao, Amparo Martínez, Joseph S. Masangkay, Maho Masaoka, Raffaele Mazza, John C. McEwan, Marco Milanesi, Md. Omar Faruque, Yuto Nomura, Nadjet"Amina Ouchene"Khelifi, Filipe Pereira, Goutam Sahana, Mazdak Salavati, Shinji Sasazaki, Anne Da Silva, Mojca Sim"i", Johann Soelkner, Alison Sutherland, Johannes Tigchelaar, Hongping Zhang, Paolo Ajmone"Marsan, Daniel G. Bradley, Licia Colli, Cord Drögemüller, Yu Jiang, Chuzhao Lei, Hideyuki Mannen, François Pompanon, Gwenola Tosser"Klopp, Johannes A. Lenstra, Geographical contrasts of Y-chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions, 2022
Evelyn T. Todd, Laure Tonasso"Calvière, Loreleï Chauvey, Stéphanie Schiavinato, Antoine Fages, Andaine Seguin"Orlando, Pierre Clavel, Naveed Khan, Lucía Pérez-Pardal, Laura Patterson Rosa, Pablo Librado, Harald Ringbauer, Marta Pereira Verdugo, John Southon, Jean"Marc Aury, Aude Perdereau, Emmanuelle Vila, Matilde Marzullo, Ornella Prato, U. Tecchiati, Giovanna Bagnasco Gianni, Antonio Tagliacozzo, Vincenzo Tinè, Francesca Alhaique, João Luís Cardoso, Maria João Valente, Miguel Telles Antunes, Laurent Frantz, Beth Shapiro, Daniel G. Bradley, Nicolas Boulbes, Armelle Gardeisen, Liora Kolska Horwitz, Aliye Öztan, Benjamin S. Arbuckle, Vedat Onar, Benoît Clavel, Sébastien Lepetz, Ali A. Vahdati, Hossein Davoudi, Azadeh Fatemeh Mohaseb, Marjan Mashkour, Olivier Bouchez, Cécile Donnadieu, Patrick Wincker, Samantha A. Brooks, Albano Beja"Pereira, Dong"Dong Wu, Ludovic Orlando, The genomic history and global expansion of domestic donkeys, Science, 377, (6611), 2022, p1172 - 1180, p1172-1180
Daly KG, Arbuckle BS, Rossi C, Mattiangeli V, Lawlor PA, Mashkour M, Sauer E, Lesur J, Atici L, Erek CM, Bradley DG., A novel lineage of the Capra genus discovered in the Taurus Mountains of Turkey using ancient genomics, ELIFE, 2022
James A. Ward, Gillian P. McHugo, Michael J. Dover, Thomas J. Hall, Said I. Ng"ang"a, Tad S. Sonstegard, Daniel G. Bradley, Laurent Frantz, Michael Salter"Townshend, David E. MacHugh, Genome-wide local ancestry and evidence for mitonuclear coadaptation in African hybrid cattle populations, iScience, 25, (7), 2022, p104672 - 104672, p104672-104672
Daly KG, Mattiangeli V, Hare AJ, Davoudi H, Fathi H, Doost SB, Amiri S, Khazaeli R, Decruyenaere D, Nokandeh J, Richter T, Darabi H, Mortensen P, Pantos A, Yeomans L, Bangsgaard P, Mashkour M, Zeder MA, Bradley DG., Herded and hunted goat genomes from the dawn of domestication in the Zagros Mountains, Proc Natl Acad Sci U S A., 2021
Emmanuelle Vila, Philippe Abrahami, Moussab Albesso, Agraw Amane, Camille Bader, Rémi Berthon, Sofiane Bouzid, Daniel G. Bradley, Catherine Bréniquet, Jwana Chahoud, Thomas Cucchi, Hossein Davoudi, Bea De Cupere, Gilles Escarguel, Oscar Estrada, Lionel Gourichon, Daniel Helmer, Wei Huangfu, Joséphine Lesur, Marjan Mashkour, Cécile Michel, Azadeh Fatemeh Mohaseb, Ludovic Orlando, François Pompanon, Jacqueline Studer, Manon Vuillien, EVOSHEEP: the makeup of sheep breeds in the ancient Near East, Antiquity, 95, (379), 2021
Cooke, N.P. and Mattiangeli, V. and Cassidy, L.M. and Okazaki, K. and Stokes, C.A. and Onbe, S. and Hatakeyama, S. and Machida, K. and Kasai, K. and Tomioka, N. and Matsumoto, A. and Ito, M. and Kojima, Y. and Bradley, D.G. and Gakuhari, T. and Nakagome, S., Ancient genomics reveals tripartite origins of Japanese populations, Science Advances, 7, (38), 2021
Sinding M-H, Ciucani M, Ramos-Madrigal J,Carmagnini A, RasmussenJA, Feng S, Chen G, Vieira FG, Mattiangeli V, Rajinder K.Ganjo RK, Larson G, Sicheritz-Pontén T, Petersen B, Frantz L, Gilbert MTP, Bradley DG, Kouprey (Bos sauveli) genomes unveil polytomic origin of wild Asian Bos, iScience, 2021
Tatiana R. Feuerborn, Alberto Carmagnini, Robert J. Losey, Tatiana Nomokonova, Arthur Askeyev, Igor Askeyev, Oleg Askeyev, Ekaterina Antipina, Martin Appelt, Olga P. Bachura, Fiona Beglane, Daniel G. Bradley, Kevin G. Daly, Shyam Gopalakrishnan, Kristian Murphy Gregersen, Chunxue Guo, ". ". """"", Carleton Jones, ". ". """""""", Yaroslav V. Kuzmin, Valeria Mattiangeli, Angela Perri, Andre" V. Plekhanov, Jazmín Ramos"Madrigal, Anne Lisbeth Schmidt, Dilyara N. Shaymuratova, Oliver Smith, Lilia V. Yavorskaya, Guojie Zhang, Eske Willerslev, Morten Meldgaard, M. Thomas P. Gilbert, Greger Larson, Love Dalén, Anders J. Hansen, Mikkel"Holger S. Sinding, Laurent Frantz, Modern Siberian dog ancestry was shaped by several thousand years of Eurasian-wide trade and human dispersal, Proceedings of the National Academy of Sciences, 118, (39), 2021
Laurent Frantz, Daniel G. Bradley, Greger Larson, Ludovic Orlando, Animal domestication in the era of ancient genomics, Nature Reviews Genetics, 21, (8), 2020, p449 - 460, p449-460
Zhuqing Zheng, Xihong Wang, Ming Li, Yunjia Li, Zhirui Yang, Xiaolong Wang, Xiangyu Pan, Mian Gong, Yu Zhang, Yingwei Guo, Yu Wang, Jing Liu, Yudong Cai, Qiuming Chen, Moses Okpeku, Licia Colli, Dawei Cai, Kun Wang, Shisheng Huang, Tad S. Sonstegard, Ali Esmailizadeh, Wenguang Zhang, Tingting Zhang, Yangbin Xu, Naiyi Xu, Yi Yang, Jianlin Han, Lei Chen, Joséphine Lesur, Kevin G. Daly, Daniel G. Bradley, Rasmus Heller, Guojie Zhang, Wen Wang, Yulin Chen, Yu Jiang, The origin of domestication genes in goats, Science Advances, 6, (21), 2020, peaaz5216 - eaaz5216, peaaz5216-eaaz5216
Mattiangeli V, Cooke NP, Ó Maoldúin R, Sikora M, Mulhall M, Bradley DG, Teasdale MD., Genomic analysis of Irish bog butter, Journal of Archaeological Science, 2020
Margaryan A, Lawson DJ, Sikora M, Racimo F, Rasmussen S, Moltke I, Cassidy LM, Jørsboe E, Ingason A, Pedersen MW, Korneliussen T, Wilhelmson H, Bu" MM, de Barros Damgaard P, Martiniano R, Renaud G, Bhérer C, Moreno-Mayar JV, Fotakis AK, Allen M, Allmäe R, Molak M, Cappellini E, Scorrano G, McColl H, Buzhilova A, Fox A, Albrechtsen A, Schütz B, Skar B, Arcini C, Falys C, Jonson CH, B"aszczyk D, Pezhemsky D, Turner-Walker G, Gestsdóttir H, Lundstrøm I, Gustin I, Mainland I, Potekhina I, Muntoni IM, Cheng J, Stenderup J, Ma J, Gibson J, Peets J, Gustafsson J, Iversen KH, Simpson L, Strand L, Loe L, Sikora M, Florek M, Vretemark M, Redknap M, Bajka M, Pushkina T, Søvsø M, Grigoreva N, Christensen T, Kastholm O, Uldum O, Favia P, Holck P, Sten S, Arge SV, Ellingvåg S, Moiseyev V, Bogdanowicz W, Magnusson Y, Orlando L, Pentz P, Jessen MD, Pedersen A, Collard M, Bradley DG, Jørkov ML, Arneborg J, Lynnerup N, Price N, Gilbert MTP, Allentoft ME, Bill J, Sindbæk SM, Hedeager L, Kristiansen K, Nielsen R, Werge T, Willerslev E., Population genomics of the Viking world., Nature, 585, (7825), 2020, p390-396
Ioannis Kontopoulos, Kirsty Penkman, Victoria E. Mullin, Laura Winkelbach, Martina Unterländer, Amelie Scheu, Susanne Kreutzer, Henrik B. Hansen, Ashot Margaryan, Matthew D. Teasdale, Birgit Gehlen, Martin Street, Niels Lynnerup, Ioannis Liritzis, """""""""" """""", Christina Papageorgopoulou, Morten E. Allentoft, Joachim Bürger, Daniel G. Bradley, Matthew J. Collins, Screening archaeological bone for palaeogenetic and palaeoproteomic studies, PLoS ONE, 15, (6), 2020, pe0235146 - e0235146, pe0235146-e0235146
Cassidy LM, Maoldúin RÓ, Kador T, Lynch A, Jones C, Woodman PC, Murphy E, Ramsey G, Dowd M, Noonan A, Campbell C, Jones ER, Mattiangeli V, Bradley DG., A dynastic elite in monumental Neolithic society., Nature, 582, (7812), 2020, p384-388
Rey-Iglesia A, Lister AM, Campos PF, Brace S, Mattiangeli V, Daly KG, Teasdale MD, Bradley DG, Barnes I, Hansen AJ., Exploring the phylogeography and population dynamics of the giant deer (Megaloceros giganteus) using Late Quaternary mitogenomes, Proc Biol Sci. B, 2020
Ring, S.C. and Purfield, D.C. and Good, M. and Breslin, P. and Ryan, E. and Blom, A. and Evans, R.D. and Doherty, M.L. and Bradley, D.G. and Berry, D.P., Variance components for bovine tuberculosis infection and multi-breed genome-wide association analysis using imputed whole genome sequence data, PLoS ONE, 14, (2), 2019
Verdugo, M.P. and Mullin, V.E. and Scheu, A. and Mattiangeli, V. and Daly, K.G. and Maisano Delser, P. and Hare, A.J. and Burger, J. and Collins, M.J. and Kehati, R. and Hesse, P. and Fulton, D. and Sauer, E.W. and Mohaseb, F.A. and Davoudi, H. and Khazaeli, R. and Lhuillier, J. and Rapin, C. and Ebrahimi, S. and Khasanov, M. and Vahidi, S.M.F. and MacHugh, D.E. and ErtuÄ rul, O. and Koukouli-Chrysanthaki, C. and Sampson, A. and Kazantzis, G. and Kontopoulos, I. and Bulatovic, J. and StojanoviÄ , I. and Mikdad, A. and Benecke, N. and LinstÀdter, J. and Sablin, M. and Bendrey, R. and Gourichon, L. and Arbuckle, B.S. and Mashkour, M. and Orton, D. and Horwitz, L.K. and Teasdale, M.D. and Bradley, D.G., Ancient cattle genomics, origins, and rapid turnover in the Fertile Crescent, Science (New York, N.Y.), 365, (6449), 2019, p173-176
Frantz, L.A.F. and Haile, J. and Lin, A.T. and Scheu, A. and Geörg, C. and Benecke, N. and Alexander, M. and Linderholm, A. and Mullin, V.E. and Daly, K.G. and Battista, V.M. and Price, M. and Gron, K.J. and Alexandri, P. and Arbogast, R.-M. and Arbuckle, B. and BÇ lÇ Å escu, A. and Barnett, R. and Bartosiewicz, L. and Baryshnikov, G. and Bonsall, C. and BoriÄ , D. and BoroneanÅ£, A. and BulatoviÄ , J. and à akirlar, C. and Carretero, J.-M. and Chapman, J. and Church, M. and Crooijmans, R. and De Cupere, B. and Detry, C. and Dimitrijevic, V. and DumitraÅ cu, V. and Du Plessis, L. and Edwards, C.J. and Erek, C.M. and Erim-Ã-zdoǧan, A. and Ervynck, A. and Fulgione, D. and Gligor, M. and Götherström, A. and Gourichon, L. and Groenen, M.A.M. and Helmer, D. and Hongo, H. and Horwitz, L.K. and Irving-Pease, E.K. and Lebrasseur, O. and Lesur, J. and Malone, C. and Manaseryan, N. and Marciniak, A. and Martlew, H. and Mashkour, M. and Matthews, R. and Matuzeviciute, G.M. and Maziar, S. and Meijaard, E. and McGovern, T. and Megens, H.-J. and Miller, R. and Mohaseb, A.F. and Orschiedt, J. and Orton, D. and Papathanasiou, A. and Pearson, M.P. and Pinhasi, R. and RadmanoviÄ , D. and Ricaut, F.-X. and Richards, M. and Sabin, R. and Sarti, L. and Schier, W. and Sheikhi, S. and Stephan, E. and Stewart, J.R. and Stoddart, S. and Tagliacozzo, A. and TasiÄ , N. and Trantalidou, K. and Tresset, A. and Valdiosera, C. and Van Den Hurk, Y. and Van Poucke, S. and Vigne, J.-D. and Yanevich, A. and Zeeb-Lanz, A. and Triantafyllidis, A. and Gilbert, M.T.P. and Schibler, J. and Rowley-Conwy, P. and Zeder, M. and Peters, J. and Cucchi, T. and Bradley, D.G. and Dobney, K. and Burger, J. and Evin, A. and Girdland-Flink, L. and Larson, G., Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe, Proceedings of the National Academy of Sciences of the United States of America, 116, (35), 2019, p17231-17238
Daly, K.G. and Delser, P.M. and Mullin, V.E. and Scheu, A. and Mattiangeli, V. and Teasdale, M.D. and Hare, A.J. and Burger, J. and Verdugo, M.P. and Collins, M.J. and Kehati, R. and Erek, C.M. and Bar-Oz, G. and Pompanon, F. and Cumer, T. and à akırlar, C. and Mohaseb, A.F. and Decruyenaere, D. and Davoudi, H. and à evik, Ã-. and Rollefson, G. and Vigne, J.-D. and Khazaeli, R. and Fathi, H. and Doost, S.B. and Sorkhani, R.R. and Vahdati, A.A. and Sauer, E.W. and Kharanaghi, H.A. and Maziar, S. and Gasparian, B. and Pinhasi, R. and Martin, L. and Orton, D. and Arbuckle, B.S. and Benecke, N. and Manica, A. and Horwitz, L.K. and Mashkour, M. and Bradley, D.G., Ancient goat genomes reveal mosaic domestication in the Fertile Crescent, Science, 361, (6397), 2018, p85-88
Cahill, J.A. and Heintzman, P.D. and Harris, K. and Teasdale, M.D. and Kapp, J. and Soares, A.E.R. and Stirling, I. and Bradley, D. and Edwards, C.J. and Graim, K. and Kisleika, A.A. and Malev, A.V. and Monaghan, N. and Green, R.E. and Shapiro, B., Genomic Evidence of Widespread Admixture from Polar Bears into Brown Bears during the Last Ice Age, Molecular biology and evolution, 35, (5), 2018, p1120-1129
Chen, N. and Cai, Y. and Chen, Q. and Li, R. and Wang, K. and Huang, Y. and Hu, S. and Huang, S. and Zhang, H. and Zheng, Z. and Song, W. and Ma, Z. and Ma, Y. and Dang, R. and Zhang, Z. and Xu, L. and Jia, Y. and Liu, S. and Yue, X. and Deng, W. and Zhang, X. and Sun, Z. and Lan, X. and Han, J. and Chen, H. and Bradley, D.G. and Jiang, Y. and Lei, C., Whole-genome resequencing reveals world-wide ancestry and adaptive introgression events of domesticated cattle in East Asia, Nature Communications, 9, (1), 2018
Byrne RP, Martiniano R, Cassidy LM, Carrigan M, Hellenthal G, Hardiman O, Bradley DG, McLaughlin RL, Insular Celtic population structure and genomic footprints of migration, PLOS Genetics, 14, 2018, pe1007152
Stella, A. and Nicolazzi, E.L. and Van Tassell, C.P. and Rothschild, M.F. and Colli, L. and Rosen, B.D. and Sonstegard, T.S. and Crepaldi, P. and Tosser-Klopp, G. and Joost, S. and Amills, M. and Ajmone-Marsan, P. and Bertolini, F. and Boettcher, P. and Boyle Onzima, R. and Bradley, D. and Buja, D. and Cano Pereira, M.E. and Carta, A. and Catillo, G. and Crisà , A. and Del Corvo, M. and Daly, K. and Droegemueller, C. and Duruz, S. and Elbeltagi, A. and Esmailizadeh, A. and Faco, O. and Figueiredo Cardoso, T. and Flury, C. and Garcia, J.F. and Guldbrandtsen, B. and Haile, A. and Hallsteinn Hallsson, J. and Heaton, M. and Hunnicke Nielsen, V. and Huson, H. and Kijas, J. and Lenstra, J.A. and Marras, G. and Milanesi, M. and Minhui, C. and Moaeen-Ud-Din, M. and Morry O'Donnell, R. and Moses Danlami, O. and Mwacharo, J. and PalhiÚre, I. and Pilla, F. and Poli, M. and Reecy, J. and Rischkowsky, B.A. and Rochat, E. and Rupp, R. and Sayre, B. and Servin, B. and Silva, K. and Spangler, G. and Steri, R. and Talenti, A. and Tortereau, F. and Vajana, E. and Zhang, W., AdaptMap: Exploring goat diversity and adaptation, Genetics Selection Evolution, 50, (1), 2018
Maixner, F. and Turaev, D. and Cazenave-Gassiot, A. and Janko, M. and Krause-Kyora, B. and Hoopmann, M.R. and Kusebauch, U. and Sartain, M. and Guerriero, G. and O'Sullivan, N. and Teasdale, M. and Cipollini, G. and Paladin, A. and Mattiangeli, V. and Samadelli, M. and Tecchiati, U. and Putzer, A. and Palazoglu, M. and Meissen, J. and Lösch, S. and Rausch, P. and Baines, J.F. and Kim, B.J. and An, H.-J. and Gostner, P. and Egarter-Vigl, E. and Malfertheiner, P. and Keller, A. and Stark, R.W. and Wenk, M. and Bishop, D. and Bradley, D.G. and Fiehn, O. and Engstrand, L. and Moritz, R.L. and Doble, P. and Franke, A. and Nebel, A. and Oeggl, K. and Rattei, T. and Grimm, R. and Zink, A., The Iceman's Last Meal Consisted of Fat, Wild Meat, and Cereals, Current Biology, 2018, p2348-2355
Schroeder, H. and Sikora, M. and Gopalakrishnan, S. and Cassidy, L.M. and Delser, P.M. and Velasco, M.S. and Schraiber, J.G. and Rasmussen, S. and Homburger, J.R. and à vila-Arcos, M.C. and Allentoft, M.E. and VÃctor Moreno-Mayar, J. and Renaud, G. and Gómez-Carballa, A. and Laffoon, J.E. and Hopkins, R.J.A. and Higham, T.F.G. and Carr, R.S. and Schaffer, W.C. and Day, J.S. and Hoogland, M. and Salas, A. and Bustamante, C.D. and Nielsen, R. and Bradley, D.G. and Hofman, C.L. and Willerslev, E., Origins and genetic legacies of the Caribbean Taino, Proceedings of the National Academy of Sciences of the United States of America, 115, (10), 2018, p2341-2346
CookeN., Bradley D.G., Nakagome S., A simulation study on the origin of natural selection in an admixed population, Irish Society of Human Genetics 2018, Dublin, Ireland, September 21st, 2018
Lara M. Cassidy, Matthew D. Teasdale, Sean Carolan, Ruth Enright, Raymond Werner, Daniel G. Bradley, Emma K. Finlay, Valeria Mattiangeli, Capturing goats: Documenting two hundred years of mitochondrial DNA diversity among goat populations from Britain and Ireland, Biology Letters, Volume 13, (Issue 3), 2017
Rui Martiniano, Lara M. Cassidy, Ros Ó Maoldúin, Russell L. McLaughlin, Nuno Silva, Licínio Manco, Daniel Fidalgo, Tânia Pereira, Maria João Coelho, Miguel Serra, Joachim Bürger, Rui Parreira, Elena Morán, António Carlos Valera, Eduardo Porfírio, Rui Boaventura, Ana María Silva, Daniel G. Bradley, The Population Genomics Of Archaeological Transition In West Iberia, 2017, p134254-
Martiniano R, Cassidy LM, Ó'Maoldúin R, McLaughlin R, Silva NM, Manco L, Fidalgo D, Pereira T, Coelho MJ, Serra M, Burger J, Parreira R, Moran E, Valera AC, Porfirio E, Boaventura R, Silva AM, Bradley DG., The population genomics of archaeological transition in west Iberia: Investigation of ancient substructure using imputation and haplotype-based methods, PLoS Genetics, 13, 2017, pe1006852
Siska, V. and Jones, E.R. and Jeon, S. and Bhak, Y. and Kim, H.-M. and Cho, Y.S. and Kim, H. and Lee, K. and Veselovskaya, E. and Balueva, T. and Gallego-Llorente, M. and Hofreiter, M. and Bradley, D.G. and Eriksson, A. and Pinhasi, R. and Bhak, J. and Manica, A., Genome-wide data from two early Neolithic East Asian individuals dating to 7700 years ago, Science Advances, 3, (2), 2017, pe1601877. -
Jones, E.R. and Zarina, G. and Moiseyev, V. and Lightfoot, E. and Nigst, P.R. and Manica, A. and Pinhasi, R. and Bradley, D.G., The Neolithic Transition in the Baltic Was Not Driven by Admixture with Early European Farmers, Current Biology, 27, (4), 2017, p576-582
Hollund H.I, Teasdale M.D, Mattiangeli V, Sverrisdóttir O.O, Bradley D.G, O'Connor T, Pick the Right Pocket. Sub-sampling of Bone Sections to Investigate Diagenesis and DNA Preservation, International Journal of Osteoachaeology, 27, (3), 2017, p365-374
Teasdale, M.D. and Fiddyment, S. and VnouÄ ek, J. and Mattiangeli, V. and Speller, C. and Binois, A. and Carver, M. and Dand, C. and Newfield, T.P. and Webb, C.C. and Bradley, D.G. and Collins, M.J., The york gospels: A 1000-year biological palimpsest, Royal Society Open Science, 4, (10), 2017
McLaughlin RL, Schijven D, van Rheenen W, van Eijk KR, O'Brien M, Kahn RS, Ophoff RA, Goris A, Bradley DG, Al-Chalabi A, van den Berg LH, Luykx JJ, Hardiman O, Veldink JH, Project MinE GWAS Consortium, Schizophrenia Working Group of the Psychiatric Genomics Consortium, Genetic correlation between amyotrophic lateral sclerosis and schizophrenia., Nature Communications, 2017, p14774
Llorente, M.G. and Jones, E.R. and Eriksson, A. and Siska, V. and Arthur, K.W. and Arthur, J.W. and Curtis, M.C. and Stock, J.T. and Coltorti, M. and Pieruccini, P. and Stretton, S. and Brock, F. and Higham, T. and Park, Y. and Hofreiter, M. and Bradley, D.G. and Bhak, J. and Pinhasi, R. and Manica, A., Erratum: Ancient Ethiopian genome reveals extensive Eurasian admixture in Eastern Africa (Science (2016) 351:6275)), Science, 351, (6275), 2016
Richardson I.W, Berry D.P, Wiencko H.L, Higgins I.M, More S.J, McClure J, Lynn D.J, Bradley D.G, A genome-wide association study for genetic susceptibility to Mycobacterium bovis infection in dairy cattle identifies a susceptibility QTL on chromosome 23, Genetics Selection Evolution, 48, (1), 2016, p19-
Cassidy L.M, Martiniano R, Murphy E.M, Teasdale M.D, Mallory J, Hartwell B, Bradley D.G, Neolithic and Bronze Age migration to Ireland and establishment of the insular atlantic genome, Proceedings of the National Academy of Sciences of the United States of America, 113, (2), 2016, p368 - 373
Kate E. Killick, Kirsten E. McLoughlin, Nicolas Nalpas, Lucy Burkitt-Gray, Ian W. Richardson, Heather L. Wiencko, David A. Magee, John A. Browne, Bernardo Villarreal"Ramos, H. M. Vordermeier, D.P. Berry, Daniel G. Bradley, Eamonn Gormley, Stephen V. Gordon, David E. MacHugh, P6025 Network-based integration of gene expression and genome-wide association data to prioritize genomic variants associated with susceptibility/resistance to bovine tuberculosis, Journal of Animal Science, 94, (suppl_4), 2016, p160 - 161, p160-161
O'Sullivan N.J, Teasdale M.D, Mattiangeli V, Maixner F, Pinhasi R, Bradley D.G, Zink A, A whole mitochondria analysis of the Tyrolean Iceman's leather provides insights into the animal sources of Copper Age clothing, Scientific Reports, 6, 2016, p31279 -
Iyer P.M, Fagan A.J, Meaney J.F, Colgan N.C, Meredith S.D, Driscoll D.O, Curran K.M, Bradley D, Redmond J, Horizontal nystagmus and multiple sclerosis using 3-Tesla magnetic resonance imaging, Irish Journal of Medical Science, 185, (4), 2016, p881-886
Frantz L.A, Mullin V.E, Pionnier-Capitan M, Lebrasseur O, Ollivier M, Perri A, Linderholm A, Mattiangeli V, Teasdale M.D, Dimopoulos E.A, Tresset A, Duffraisse M, McCormick F, Bartosiewicz L, Gál E, Nyerges à A, Sablin M.V, Bréhard S, Mashkour M, BÄ lÄ Å escu A, Gillet B, Hughes S, Chassaing O, Hitte C, Vigne J.-D, Dobney K, HÀnni C, Bradley D.G, Larson G, Genomic and archaeological evidence suggest a dual origin of domestic dogs, Science (New York, N.Y.), 352, (6290), 2016, p1228 - 1231
Broushaki F, Thomas M.G, Link I, López S, Van Dorp L, Kirsanow K, Hofmanová Z, Diekmann Y, Cassidy L.M, DÃez-Del-Molino D, Kousathanas A, Sell C, Robson H.K, Martiniano R, Blöcher J, Scheu A, Kreutzer S, Bollongino R, Bobo D, Davoudi H, Munoz O, Currat M, Abdi K, Biglari F, Craig O.E, Bradley D.G, Shennan S, Veeramah K.R, Mashkour M, Wegmann D, Hellentha G, Burger J, Early Neolithic genomes from the eastern Fertile Crescent, Science, 353, (6298), 2016, p499 - 503
Gamba, C. and HanghÞj, K. and Gaunitz, C. and Alfarhan, A.H. and Alquraishi, S.A. and Al-Rasheid, K.A.S. and Bradley, D.G. and Orlando, L., Comparing the performance of three ancient DNA extraction methods for high-throughput sequencing, Molecular Ecology Resources, 16, (2), 2016, p459-469
Martiniano R, Caffell A, Holst M, Hunter-Mann K, Montgomery J, MÃ"ldner G, McLaughlin R.L, Teasdale M.D, Van Rheenen W, Veldink J.H, Van Den Berg L.H, Hardiman O, Carroll M, Roskams S, Oxley J, Morgan C, Thomas M.G, Barnes I, McDonnell C, Collins M.J, Bradley D.G, Genomic signals of migration and continuity in Britain before the Anglo-Saxons, Nature Communications, 7, 2016, 10326-
Hofmanová Z, Kreutzer S, Hellenthal G, Sell C, Diekmann Y, DÃez-Del-Molino D, Van Dorp L, López S, Kousathanas A, Link V, Kirsanow K, Cassidy L.M, Martiniano R, Strobel M, Scheu A, Kotsakis K, Halstead P, Triantaphyllou S, Kyparissi-Apostolika N, Urem-Kotsou D, Ziota C, Adaktylou F, Gopalan S, Bobo D.M, Winkelbach L, Blöcher J, UnterlÀnder M, Leuenberger C, à ilingiroǧlu C, Horejs B, Gerritsen F, Shennan S.J, Bradley D.G, Currat M, Veeramah K.R, Wegmann D, Thomas M.G, Papageorgopoulou C, Burger J, Early farmers from across Europe directly descended from Neolithic Aegeans, Proceedings of the National Academy of Sciences of the United States of America, 113, (25), 2016, p6886 - 6891
Russell Lewis McLaughlin, Kevin P Kenna, Alice Vajda, Peter Bede, Marwa Elamin, Simon Cronin, Colette G Donaghy, Daniel G Bradley, Orla Hardiman, A second-generation Irish genome-wide association study for amyotrophic lateral sclerosis, Neurobiology of Aging , 36, (2), 2015, p1221.e7-1221.e13
Jones ER, Gonzalez-Fortes G, Connell S, Siska V, Eriksson A, Martiniano R, McLaughlin RL, Gallego Llorente M, Cassidy LM, Gamba C, Meshveliani T, Bar-Yosef O, Müller W, Belfer-Cohen A, Matskevich Z, Jakeli N, Higham TF, Currat M, Lordkipanidze D, Hofreiter M, Manica A, Pinhasi R, Bradley DG, Upper Palaeolithic genomes reveal deep roots of modern Eurasians., Nature communications, 6, 2015, p8912
Teasdale, M.D. van Doorn, N.L. Fiddyment, S. Webb, C.C. O-Connor, T. Hofreiter, M. Collins, M.J. Bradley, D.G., Paging through history: Parchment as a reservoir of ancient DNA for next generation sequencing, Philosophical Transactions B, 370, (1660), 2015, p1-7
Gargani, M. Pariset, L. Lenstra, J.A. De Minicis, E. Moazami-Goudarzi, K. Laloë, D. Williams, J.L. Wiener, P. Bradley, D.G. Erhardt, G. Harlizius, B. Medugorac, I. Looft, M.C. Kalm, E. Cañón, J. Dunner, S. Rodellar, C. Martín-Burriel, I. Sanchez, A. Martínez, A.M. Ginja, C. Ajmone-Marsan, P. Pilla, F. Bruzzone, A. Marletta, D. Holm, L.E. Dolf, G. Valentini, A., Microsatellite genotyping of medieval cattle from central Italy suggests an old origin of Chianina and Romagnola cattle, Frontiers of Genetics, 5, (FEB), 2015, p68-
Bede P, Elamin M, Byrne S, McLaughlin RL, Kenna K, Vajda A, Fagan A, Bradley DG, Hardiman O., Patterns of cerebral and cerebellar white matter degeneration in ALS., J Neurol Neurosurg Psychiatry, 86, (4), 2015, p468-470
McLaughlin RL, Kenna KP, Vajda A, Bede P, Elamin M, Cronin S, Donaghy CG, Bradley DG, Hardiman O, Second-generation Irish genome-wide association study for amyotrophic lateral sclerosis., Neurobiology of aging, 36, (2), 2015, p1221.e7-13
Aloraifi F, McDevitt T, Martiniano R, McGreevy J, McLaughlin R, Egan CM, Cody N, Meany M, Kenny E, Green AJ, Bradley DG, Geraghty JG, Bracken AP., Detection of novel germline mutations for breast cancer in non-BRCA1/2 families., FEBS J., 282, (17), 2015, p3424 - 3437
Purfield D.C, Bradley D.G, Evans R.D, Kearney F.J, Berry D.P, Genome-wide association study for calving performance using high-density genotypes in dairy and beef cattle, Genetics Selection Evolution, 47, (1), 2015
Kassahun Y, Mattiangeli V, Ameni G, Hailu E, Aseffa A, Young D.B, Hewinson R.G, Vordermeier H.M, Bradley D.G, Admixture mapping of tuberculosis and pigmentation-related traits in an African-European hybrid cattle population, Frontiers in Genetics, 6, (JUN), 2015
McLaughlin RL, Kenna KP, Vajda A, Heverin M, Byrne S, Donaghy CG, Cronin S, Bradley DG, Hardiman O, Homozygosity mapping in an Irish ALS case-control cohort describes local demographic phenomena and points towards potential recessive risk loci., Genomics, 105, (4), 2015, p237-41
McLaughlin RL, Kenna KP, Vajda A, Heverin M, Byrne S, Donaghy CG, Cronin S, Bradley DG, Hardiman O., Homozygosity mapping in an Irish ALS case-control cohort describes local demographic phenomena and points towards potential recessive risk loci, Genomics , 105, (4), 2015, p237-241
Stephen D. E. Park, David A. Magee, Paul McGettigan, Matthew D. Teasdale, Ceiridwen J. Edwards, Amanda J. Lohan, Alison Murphy, Martin Braud, Mark T.A. Donoghue, Yuan Liu, Andrew Chamberlain, Kévin Rue-Albrecht, Steven Schroeder, Charles Spillane, Shuaishuai Tai, Daniel G. Bradley, Tad S. Sonstegard, Brendan Loftus, David E. MacHugh, Genome sequencing of the extinct Eurasian wild aurochs, Bos primigenius, illuminates the phylogeography and evolution of cattle, Genome biology, 16, (1), 2015, p234 - 234, p234-234
Vegh, P. Magee, D.A. Nalpas, N.C. Bryan, K. McCabe, M.S. Browne, J.A. Conlon, K.M. Gordon, S.V. Bradley, D.G. Machugh, D.E. Lynn, D.J., MicroRNA profiling of the bovine alveolar macrophage response to Mycobacterium bovis infection suggests pathogen survival is enhanced by microRNA regulation of endocytosis and lysosome trafficking, Tuberculosis, 95, (1), 2015, p60 - 67
Fiddyment S, Holsinger B, Ruzzier C, Devine A, Binois A, Albarella U, Fischer R, Nichols E, Curtis A, Cheese E, Teasdale M.D, Checkley-Scott C, Milner S.J, Rudy K.M, Johnson E.J, Vnoucek J, Garrison M, McGrory S, Bradley D.G, Collins M.J, Animal origin of 13th-century uterine vellum revealed using noninvasive peptide fingerprinting, Proceedings of the National Academy of Sciences of the United States of America, 112, (49), 2015, p15066 - 15071
M. Gallego-Llorente, Eppie R. Jones, Anders Eriksson, Veronika Siska, Kathryn Weedman Arthur, John Arthur, Matthew C. Curtis, Jay T. Stock, Mauro Coltorti, Pierluigi Pieruccini, Sean Stretton, Fiona Brock, Thomas Higham, Y. Park, Michael Hofreiter, Daniel G. Bradley, Jong Bhak, R. Pinhasi, Andrea Manica, Ancient Ethiopian genome reveals extensive Eurasian admixture in Eastern Africa, Science, 350, (6262), 2015, p820 - 822, p820-822
Sanderson, N.D. Norman, P.J. Guethlein, L.A. Ellis, S.A. Williams, C. Breen, M. Park, S.D.E. Magee, D.A. Babrzadeh, F. Warry, A. Watson, M. Bradley, D.G. MacHugh, D.E. Parham, P. Hammond, J.A., Definition of the cattle killer cell Ig-like receptor gene family: Comparison with aurochs and human counterparts, Journal of Immunology, 193, (12), 2014, p6016 - 6030
Fahey C, Byrne S, McLaughlin R, Kenna K, Shatunov A, Donohoe G, Gill M, Al-Chalabi A, Bradley DG, Hardiman O, Corvin AP, Morris DW, Analysis of the hexanucleotide repeat expansion and founder haplotype at C9ORF72 in an Irish psychosis case-control sample., Neurobiology of aging, 35, (6), 2014, p1510.e1-1510.e5
Authors of Document Lenstra, J.A., Ajmone-Marsan, P., Beja-Pereira, A., (...), Negrini, R., Radoslavov, G.A. , Meta-Analysis of mitochondrial DNA reveals several population bottlenecks during worldwide migrations of cattle , Diversity, 6, (1), 2014, p178-187
McLaughlin RL, Kenna KP, Vajda A, Byrne S, Bradley DG, Hardiman O, UBQLN2 mutations are not a frequent cause of amyotrophic lateral sclerosis in Ireland., Neurobiology of aging, 35, (1), 2014, p267.e9-11
Utsunomiya, YT, Bomba, L, Lucente, G, Colli, L, Negrini, R, Lenstra, JA, Erhardt, G, Garcia, JF, Ajmone-Marsan, P, European Cattle Genetic Diversity, Revisiting AFLP fingerprinting for an unbiased assessment of genetic structure and differentiation of taurine and zebu cattle, BMC GENETICS, 15, 2014, p47-
Purfield, DC, Bradley, DG, Kearney, JF, Berry, DP, Genome-wide association study for calving traits in Holstein-Friesian dairy cattle, ANIMAL, 8, (2), 2014, p224-235
Gerbault, P, Allaby, RG, Boivin, N, Rudzinski, A, Grimaldi, IM, Pires, JC, Vigueira, CC, Dobney, K, Gremillion, KJ, Barton, L, Arroyo-Kalin, M, Purugganan, MD, de Casas, RR, Bollongino, R, Burger, J, Fuller, DQ, Bradley, DG, Balding, DJ, Richerson, PJ, Gilbert, MTP, Larson, G, Thomas, MG, Storytelling and story testing in domestication, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 111, (17), 2014, p6159-6164
Larson, G., Bradley, D.G., How Much Is That in Dog Years? The Advent of Canine Population Genomics, PLoS Genetics, 10, (1), 2014, pe1004093-
P. Bede, M. Elamin, S. Byrne, R.L. McLaughlin, K.Kenna, A. Vajda, A.J. Fagan, D.G. Bradley, Patterns of cerebral and cerebellar white matter degeneration in ALS, Journal of neurology, neurosurgery, and psychiatry, 2014
Richardson, I.W. Bradley, D.G. Higgins, I.M. More, S.J. Mcclure, J. Berry, D.P., Variance components for susceptibility to Mycobacterium bovis infection in dairy and beef cattle, Genetics Selection Evolution, 46, 2014, p77 -
Martiniano, R. Coelho, C. Ferreira, M.T. Neves, M.J. Pinhasi, R. Bradley, D.G., Genetic evidence of African slavery at the beginning of the Trans-Atlantic slave trade, Scientific Reports, 4, 2014, p5994-
Kevin P. Kenna, Russell Mc Laughlin, Susan Byrne, Marwa Elamin, Mark Heverin, Elaine Kenny, Paul Cormican, Derek W. Morris, Colette Donaghy, Daniel G. Bradley, Orla Hardiman, Evaluating The True Clinical Relevance Of Genomic Intervals Associated With Amyotrophic Lateral Sclerosis (P5.039), Neurology, 82, (10_supplement), 2014
Connell, S, Meade, KG, Allan, B, Lloyd, AT, Downing, T, O'Farrelly, C, Bradley, DG, Genome-Wide Association Analysis of Avian Resistance to Campylobacter jejuni Colonization Identifies Risk Locus Spanning the CDH13 Gene, G3-GENES GENOMES GENETICS, 3, (5), 2013, p881-890
Meredith, B.K. Berry, D.P. Kearney, F. Finlay, E.K. Fahey, A.G. Bradley, D.G. Lynn, D.J., A genome-wide association study for somatic cell score using the Illumina high-density bovine beadchip identifies several novel QTL potentially related to mastitis susceptibility, Frontiers in Genetics, 4, (NOV), 2013, p229-
Bede, P, Bokde, ALW, Byrne, S, Elamin, M, McLaughlin, RL, Kenna, K, Fagan, AJ, Pender, N, Bradley, DG, Hardiman, O, Multiparametric MRI study of ALS stratified for the C9orf72 genotype, NEUROLOGY, 81, (4), 2013, p361-369
Vegh, P, Foroushani, ABK, Magee, DA, McCabe, MS, Browne, JA, Nalpas, NC, Conlon, KM, Gordon, SV, Bradley, DG, MacHugh, DE, Lynn, DJ, Profiling microRNA expression in bovine alveolar macrophages using RNA-seq, VETERINARY IMMUNOLOGY AND IMMUNOPATHOLOGY, 155, (4), 2013, p238-244
Ceiridwen J. Edwards, Simon Y.W. Ho, Ross Barnett, Peter Coxon, Daniel G. Bradley, Tom C. Lord, Terry O'Connor, Continuity of brown bear maternal lineages in northern England through the Last-glacial period, Quaternary Science Reviews, 2013
Peter Bede, Arun L.W. Bokde, Susan Byrne, Marwa Elamin, Russel McLaughlin, Kevin P. Kenna, Andrew Fagan, Niall Pender, Daniel G. Bradley, Orla Hardiman, The Neuroimaging Signature of the C9orf72 Hexanucleotide Repeat in Amyotrophic Lateral Sclerosis " A Multimodal MRI Study (S06.005), Neurology, 80, (7_supplement), 2013
Kenna, KP, McLaughlin, RL, Byrne, S, Elamin, M, Heverin, M, Kenny, EM, Cormican, P, Morris, DW, Donaghy, CG, Bradley, DG, Hardiman, O, Delineating the genetic heterogeneity of ALS using targeted high-throughput sequencing, JOURNAL OF MEDICAL GENETICS, 50, (11), 2013, p776-783
Bede, P, Elamin, M, Byrne, S, McLaughlin, RL, Kenna, K, Vajda, A, Pender, N, Bradley, DG, Hardiman, O, Basal ganglia involvement in amyotrophic lateral sclerosis, NEUROLOGY, 81, (24), 2013, p2107-2115
Kenna, K.P., Mclaughlin, R.L., Hardiman, O., Bradley, D.G., Using Reference Databases of Genetic Variation to Evaluate the Potential Pathogenicity of Candidate Disease Variants, Human Mutation, 34, (6), 2013, p836-841
Kenna, KP, McLaughlin, RL, Hardiman, O, Bradley, DG, Using Reference Databases of Genetic Variation to Evaluate the Potential Pathogenicity of Candidate Disease Variants, HUMAN MUTATION, 34, (6), 2013, p836-841
Zhang, HC, Paijmans, JLA, Chang, FQ, Wu, XH, Chen, GJ, Lei, CZ, Yang, XJ, Wei, ZY, Bradley, DG, Orlando, L, O'Connor, T, Hofreiter, M, Morphological and genetic evidence for early Holocene cattle management in northeastern China, NATURE COMMUNICATIONS, 4, 2013
Finlay EK, Berry DP, Wickham B, Gormley EP, Bradley DG, A Genome Wide Association Scan of Bovine Tuberculosis Susceptibility in Holstein-Friesian Dairy Cattle, PLoS ONE, 7 , (2, e30545), 2012
Bower, M.A., McGivney, B.A., Campana, M.G., Gu, J., Andersson, L.S., Barrett, E., Davis, C.R., (...), Hill, E.W.., The genetic origin and history of speed in the Thoroughbred racehorse, Nature Communications , 3, 2012, part. no. 643
Edwards, C.J., Soulsbury, C.D., Statham, M.J., Ho, S.Y.W., Wall, D., Dolf, G., Iossa, G., (...), Bradley, D.G., Temporal genetic variation of the red fox, Vulpes vulpes, across western Europe and the British Isles, Quaternary Science Reviews, 57, (4), 2012, 95-104
Carden, R.F., McDevitt, A.D., Zachos, F.E., Woodman, P.C., O'Toole, P., Rose, H., Monaghan, N.T., (...), Edwards, C.J., Phylogeographic, ancient DNA, fossil and morphometric analyses reveal ancient and modern introductions of a large mammal: The complex case of red deer (Cervus elaphus) in Ireland, Quaternary Science Reviews, 42, 2012, p74-84
Busby, G.B.J., Brisighelli, F., Sánchez-Diz, P., Ramos-Luis, E., Martinez-Cadenas, C., Thomas, M.G., Bradley, D.G., (...), Capelli, C., The peopling of Europe and the cautionary tale of Y chromosome lineage R-M269, Proceedings of the Royal Society B: Biological Sciences, 279, (1730), 2012, p884-892
Meredith, B.K., Kearney, F.J., Finlay, E.K., Bradley, D.G., Fahey, A.G., Berry, D.P., Lynn, D.J., Genome-wide associations for milk production and somatic cell score in Holstein-Friesian cattle in Ireland, BMC Genetics, 13, 2012, part. no. 21
Purfield, D.C., Berry, D.P., McParland, S., Bradley, D.G., Runs of homozygosity and population history in cattle, BMC Genetics, 13, 2012, part. no. 70
Byrne S, Elamin M, Bede P, Shatunov A, Walsh C, Corr B, Heverin M, Jordan N, Kenna K, Lynch C, McLaughlin RL, Iyer PM, O'Brien C, Phukan J, Wynne B, Bokde AL, Bradley DG, Pender N, Al-Chalabi A, Hardiman O, Cognitive and clinical characteristics of patients with amyotrophic lateral sclerosis carrying a C9orf72 repeat expansion: a population-based cohort study., Lancet neurology, 11, (3), 2012, p232-40
Connell S, Meade KG, Allan B, Lloyd AT, Kenny E, Cormican P, Morris DW, Bradley DG, O'Farrelly C, Avian resistance to Campylobacter jejuni colonization is associated with an intestinal immunogene expression signature identified by mRNA sequencing., PloS one, 7, (8), 2012, pe40409
le Roex, N., Noyes, H., Brass, A., Bradley, D.G., Kemp, S.J., Kay, S., van Helden, P.D., Hoal, E.G., Novel SNP Discovery in African Buffalo, Syncerus caffer, Using High-Throughput Sequencing, PLoS ONE, 7, (11), 2012, part. no. e48792
O'Meara, D.B., Edwards, C.J., Sleeman, D.P., Cross, T.F., Statham, M.J., McDowell, J.R., Dillane, E., (...), Carlsson, J.., Genetic structure of Eurasian badgers Meles meles (Carnivora: Mustelidae) and the colonization history of Ireland, Biological Journal of the Linnean Society, 106, (4), 2012, p893-909
Ceiridwen J. Edwards, Catarina Ginja, Juha Kantanen, Lucía Pérez-Pardal, Anne Tresset, Frauke Stock, European Cattle Genetic Diversity Consortium Luis T. Gama, M. Cecilia T. Penedo, Daniel G. Bradley,Johannes A. Lenstra, Isaäc J. Nijman, Dual Origins of Dairy Cattle Farming - Evidence from a Comprehensive Survey of European Y-Chromosomal Variation, PLoS ONE, 6, (1, e15922), 2011
Noyes H, Brass A, Obara I, Anderson S, Archibald AL, Bradley DG, Fisher P, Freeman A, Gibson J, Gicheru M, Hall L, Hanotte O, Hulme H, McKeever D, Murray C, Oh SJ, Tate C, Smith K, Tapio M, Wambugu J, Williams DJ, Agaba M, Kemp SJ, Genetic and expression analysis of cattle identifies candidate genes in pathways responding to Trypanosoma congolense infection., Proceedings of the National Academy of Sciences of the United States of America, 108, (22), 2011, p9304-9
Ceiridwen J. Edwards, Marc A. Suchard, Philippe Lemey, John J. Welch, Ian Barnes, Tara L. Fulton, Ross Barnett, Tamsin C. O'Connell, Peter Coxon, Nigel Monaghan, Cristina E. Valdiosera, Eline D. Lorenzen, Eske Willerslev, Gennady F. Baryshnikov, Andrew Rambaut, Mark G. Thomas, Daniel G. Bradley and Beth Shapiro, Ancient Hybridization and an Irish Origin for the Modern Polar Bear Matriline, Current Biology, 21, (15), 2011, p1251 - 1258
Downing, T., O'Farrelly, C., Bhuiyan, A.K., Silva, P., Naqvi, A.N., Sanfo, R., Sow, R.-S., (...), Bradley, D.G.., Variation in chicken populations may affect the enzymatic activity of lysozyme, Animal Genetics, 41, (2), 2010, p213-217
Chen, S., Lin, B.-Z., Baig, M., Mitra, B., Lopes, R.J., Santos, A.M., Magee, D.A., (...), Beja-Pereira, A., Zebu cattle are an exclusive legacy of the South Asia neolithic, Molecular Biology and Evolution, 27, (1), 2010, p1-6
Russell Lewis McLaughlin, Julie Phukan, William McCormack, David S. Lynch, Matthew Greenway, Simon Cronin, Jean Saunders, Agnieska Slowik, Barbara Tomik, Peter M. Andersen, Daniel G. Bradley, Phil Jakeman, Orla Hardiman, Angiogenin Levels and ANG Genotypes: Dysregulation in Amyotrophic Lateral Sclerosis, PloS ONE, 5, (11), 2010, pe15402
Magee, D.A., Berkowicz, E.W., Sikora, K.M., Sweeney, T., Kenny, D.A., Kelly, A.K., Evans, R.D., (...), MacHugh, D.E., High concordance of bovine single nucleotide polymorphism genotypes generated using two independent genotyping strategies, Animal Biotechnology , 21, (4), 2010, 257-262
Tong P, Prendergast JG, Lohan AJ, Farrington SM, Cronin S, Friel N, Bradley DG, Hardiman O, Evans A, Wilson JF, Loftus B, Sequencing and analysis of an Irish human genome., Genome Biology, 11, (9), 2010, pR91
Edwards, C.J., Magee, D.A., Park, S.D.E., McGettigan, P.A., Lohan, A.J., Murphy, A., Finlay, E.K., (...), MacHugh, D.E., A complete mitochondrial genome sequence from a mesolithic wild aurochs (Bos primigenius), PLoS ONE, 5, (2), 2010, part. no. e9255
Downing T, Lloyd AT, O'Farrelly C, Bradley DG, The differential evolutionary dynamics of avian cytokine and TLR gene classes., Journal of immunology (Baltimore, Md. : 1950), 184, (12), 2010, p6993-7000
Laloë, D., Moazami-Goudarzi, K., Lenstra, J.A., Ajmone Marsan, P., Azor, P., Baumung, R., Bradley, D.G., (...), Wiener, P., Spatial trends of genetic variation of domestic ruminants in Europe, Diversity, 2, (6), 2010, p932-945
Murray, C., Huerta-Sanchez, E., Casey, F., Bradley, D.G., Cattle demographic history modelled from autosomal sequence variation, Philosophical Transactions of the Royal Society B: Biological Sciences, 365, (1552), 2010, p2531-2539
Downing, T, Lynn, DJ, Connell, S, Lloyd, AT, Bhuiyan, AF, Silva, P, Naqvi, AN, Sanfo, R, Sow, RS, Podisi, B, O'Farrelly, C, Hanotte, O, Bradley, DG, Contrasting evolution of diversity at two disease-associated chicken genes., Immunogenetics, 61, (1), 2009, p303 - 314
Kantanen J, Edwards CJ, Bradley DG, Viinalass H, Thessler S, Ivanova Z, Kiselyova T, Cinkulov M, Popov R, Stojanovi" S, Ammosov I, Vilkki J, Maternal and paternal genealogy of Eurasian taurine cattle (Bos taurus)., Heredity, 103, (5), 2009, p404-15
Downing, T., Lynn, D.J., Connell, S., Lloyd, A.T., Bhuiyan, A.K.F.H., Silva, P., Naqvi, A.N., (...), Bradley, D.G. , Erratum: Contrasting evolution of diversity at two disease-associated chicken genes (Immunogenetics DOI: 10.1007/s00251-009-0359-x), 2009, - 421-422
Frauke Stock, Ceiridwen J. Edwards, Ruth Bollongino, Emma K. Finlay, Joachim Bürger, Daniel G. Bradley, Cytochrome b sequences of ancient cattle and wild ox support phylogenetic complexity in the ancient and modern bovine populations, Animal Genetics, 40, (5), 2009, p694 - 700, p694-700
Stock, F., Edwards, C.J., Bollongino, R., Finlay, E.K., Burger, J., Bradley, D.G., Cytochrome b sequences of ancient cattle and wild ox support phylogenetic complexity in the ancient and modern bovine populations., Animal Genetics , 40, (5), 2009, p694-700
Cormican P, Lloyd AT, Downing T, Connell SJ, Bradley D, O'Farrelly C, The avian Toll-Like receptor pathway--subtle differences amidst general conformity., Developmental and comparative immunology, 33, (9), 2009, p967-73
Elsik CG, Tellam RL, Worley KC, Gibbs RA, Muzny DM, Weinstock GM, Adelson DL, Eichler EE, Elnitski L, Guigó R, Hamernik DL, Kappes SM, Lewin HA, Lynn DJ, Nicholas FW, Reymond A, Rijnkels M, Skow LC, Zdobnov EM, Schook L, Womack J, Alioto T, Antonarakis SE, Astashyn A, Chapple CE, Chen HC, Chrast J, Câmara F, Ermolaeva O, Henrichsen CN, Hlavina W, Kapustin Y, Kiryutin B, Kitts P, Kokocinski F, Landrum M, Maglott D, Pruitt K, Sapojnikov V, Searle SM, Solovyev V, Souvorov A, Ucla C, Wyss C, Anzola JM, Gerlach D, Elhaik E, Graur D, Reese JT, Edgar RC, McEwan JC, Payne GM, Raison JM, Junier T, Kriventseva EV, Eyras E, Plass M, Donthu R, Larkin DM, Reecy J, Yang MQ, Chen L, Cheng Z, Chitko-McKown CG, Liu GE, Matukumalli LK, Song J, Zhu B, Bradley DG, Brinkman FS, Lau LP, Whiteside MD, Walker A, Wheeler TT, Casey T, German JB, Lemay DG, Maqbool NJ, Molenaar AJ, Seo S, Stothard P, Baldwin CL, Baxter R, Brinkmeyer-Langford CL, Brown WC, Childers CP, Connelley T, Ellis SA, Fritz K, Glass EJ, Herzig CT, Iivanainen A, Lahmers KK, Bennett AK, Dickens CM, Gilbert JG, Hagen DE, Salih H, Aerts J, Caetano AR, Dalrymple B, Garcia JF, Gill CA, Hiendleder SG, Memili E, Spurlock D, Williams JL, Alexander L, Brownstein MJ, Guan L, Holt RA, Jones SJ, Marra MA, Moore R, Moore SS, Roberts A, Taniguchi M, Waterman RC, Chacko J, Chandrabose MM, Cree A, Dao MD, Dinh HH, Gabisi RA, Hines S, Hume J, Jhangiani SN, Joshi V, Kovar CL, Lewis LR, Liu YS, Lopez J, Morgan MB, Nguyen NB, Okwuonu GO, Ruiz SJ, Santibanez J, Wright RA, Buhay C, Ding Y, Dugan-Rocha S, Herdandez J, Holder M, Sabo A, Egan A, Goodell J, Wilczek-Boney K, Fowler GR, Hitchens ME, Lozado RJ, Moen C, Steffen D, Warren JT, Zhang J, Chiu R, Schein JE, Durbin KJ, Havlak P, Jiang H, Liu Y, Qin X, Ren Y, Shen Y, Song H, Bell SN, Davis C, Johnson AJ, Lee S, Nazareth LV, Patel BM, Pu LL, Vattathil S, Williams RL, Curry S, Hamilton C, Sodergren E, Wheeler DA, Barris W, Bennett GL, Eggen A, Green RD, Harhay GP, Hobbs M, Jann O, Keele JW, Kent MP, Lien S, McKay SD, McWilliam S, Ratnakumar A, Schnabel RD, Smith T, Snelling WM, Sonstegard TS, Stone RT, Sugimoto Y, Takasuga A, Taylor JF, Van Tassell CP, Macneil MD, Abatepaulo AR, Abbey CA, Ahola V, Almeida IG, Amadio AF, Anatriello E, Bahadue SM, Biase FH, Boldt CR, Carroll JA, Carvalho WA, Cervelatti EP, Chacko E, Chapin JE, Cheng Y, Choi J, Colley AJ, de Campos TA, De Donato M, Santos IK, de Oliveira CJ, Deobald H, Devinoy E, Donohue KE, Dovc P, Eberlein A, Fitzsimmons CJ, Franzin AM, Garcia GR, Genini S, Gladney CJ, Grant JR, Greaser ML, Green JA, Hadsell DL, Hakimov HA, Halgren R, Harrow JL, Hart EA, Hastings N, Hernandez M, Hu ZL, Ingham A, Iso-Touru T, Jamis C, Jensen K, Kapetis D, Kerr T, Khalil SS, Khatib H, Kolbehdari D, Kumar CG, Kumar D, Leach R, Lee JC, Li C, Logan KM, Malinverni R, Marques E, Martin WF, Martins NF, Maruyama SR, Mazza R, McLean KL, Medrano JF, Moreno BT, Moré DD, Muntean CT, Nandakumar HP, Nogueira MF, Olsaker I, Pant SD, Panzitta F, Pastor RC, Poli MA, Poslusny N, Rachagani S, Ranganathan S, Razpet A, Riggs PK, Rincon G, Rodriguez-Osorio N, Rodriguez-Zas SL, Romero NE, Rosenwald A, Sando L, Schmutz SM, Shen L, Sherman L, Southey BR, Lutzow YS, Sweedler JV, Tammen I, Telugu BP, Urbanski JM, Utsunomiya YT, Verschoor CP, Waardenberg AJ, Wang Z, Ward R, Weikard R, Welsh TH, White SN, Wilming LG, Wunderlich KR, Yang J, Zhao FQ, The genome sequence of taurine cattle: a window to ruminant biology and evolution., Science (New York, N.Y.), 324, (5926), 2009, p522-8
Cronin, S, Tomik, B, Bradley, DG, Slowik, A, Hardiman, O, Screening for replication of genome-wide SNP associations in sporadic ALS., European journal of human genetics : EJHG, 17, (2), 2009, p213 - 218
Gibbs RA, Taylor JF, Van Tassell CP, Barendse W, Eversole KA, Gill CA, Green RD, Hamernik DL, Kappes SM, Lien S, Matukumalli LK, McEwan JC, Nazareth LV, Schnabel RD, Weinstock GM, Wheeler DA, Ajmone-Marsan P, Boettcher PJ, Caetano AR, Garcia JF, Hanotte O, Mariani P, Skow LC, Sonstegard TS, Williams JL, Diallo B, Hailemariam L, Martinez ML, Morris CA, Silva LO, Spelman RJ, Mulatu W, Zhao K, Abbey CA, Agaba M, Araujo FR, Bunch RJ, Burton J, Gorni C, Olivier H, Harrison BE, Luff B, Machado MA, Mwakaya J, Plastow G, Sim W, Smith T, Thomas MB, Valentini A, Williams P, Womack J, Woolliams JA, Liu Y, Qin X, Worley KC, Gao C, Jiang H, Moore SS, Ren Y, Song XZ, Bustamante CD, Hernandez RD, Muzny DM, Patil S, San Lucas A, Fu Q, Kent MP, Vega R, Matukumalli A, McWilliam S, Sclep G, Bryc K, Choi J, Gao H, Grefenstette JJ, Murdoch B, Stella A, Villa-Angulo R, Wright M, Aerts J, Jann O, Negrini R, Goddard ME, Hayes BJ, Bradley DG, Barbosa da Silva M, Lau LP, Liu GE, Lynn DJ, Panzitta F, Dodds KG, Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds., Science (New York, N.Y.), 324, (5926), 2009, p528-32
Downing T, Cormican P, O'Farrelly C, Bradley DG, Lloyd AT, Evidence of the adaptive evolution of immune genes in chicken, BMC Research Notes, 2, (254), 2009, part. no. 254
Downing T, Lynn DJ, Connell S, Lloyd AT, Bhuiyan AK, Silva P, Naqvi AN, Sanfo R, Sow RS, Podisi B, Hanotte O, O'Farrelly C, Bradley DG, Evidence of balanced diversity at the chicken interleukin 4 receptor alpha chain locus., BMC Evolutionary Biology, 9, 2009, part. no. 136
Cronin, S, Berger, S, Ding, J, Schymick, JC, Washecka, N, Hernandez, DG, Greenway, MJ, Bradley, DG, Traynor, BJ, Hardiman, O, A genome-wide association study of sporadic ALS in a homogenous Irish population., Human molecular genetics, 17, (5), 2008, p768-74
McEvoy, B, Simms, K, Bradley, DG, Genetic investigation of the patrilineal kinship structure of early medieval Ireland., American journal of physical anthropology, 136, (4), 2008, p415-22
Cronin, S, Blauw, HM, Veldink, JH, van Es, MA, Ophoff, RA, Bradley, DG, van den Berg, LH, Hardiman, O, Analysis of genome-wide copy number variation in Irish and Dutch ALS populations., Human molecular genetics, 17, (21), 2008, p392-8
Freeman, AR, Lynn, DJ, Murray, C, Bradley, DG, Detecting the effects of selection at the population level in six bovine immune genes., BMC genetics, 9, 2008, p62
Sandilands, A, Terron-Kwiatkowski, A, Hull, PR, O'Regan, GM, Clayton, TH, Watson, RM, Carrick, T, Evans, AT, Liao, H, Zhao, Y, Campbell, LE, Schmuth, M, Gruber, R, Janecke, AR, Elias, PM, van Steensel, MA, Nagtzaam, I, van Geel, M, Steijlen, PM, Munro, CS, Bradley, DG, Palmer, CN, Smith, FJ, McLean, WH, Irvine, AD, Comprehensive analysis of the gene encoding filaggrin uncovers prevalent and rare mutations in ichthyosis vulgaris and atopic eczema., Nature genetics, 39, (5), 2007, p650-4
David A. Magee, Hideyuki Mannen, Daniel G. Bradley, Duality in Bos indicus mtDNA diversity: Support for geographical complexity in zebu domestication, 2007, p385 - 391, p385-391
Larson, G, Albarella, U, Dobney, K, Rowley-Conwy, P, Schibler, J, Tresset, A, Vigne, JD, Edwards, CJ, Schlumbaum, A, Dinu, A, Balaçsescu, A, Dolman, G, Tagliacozzo, A, Manaseryan, N, Miracle, P, Van Wijngaarden-Bakker, L, Masseti, M, Bradley, DG, Cooper, A, Ancient DNA, pig domestication, and the spread of the Neolithic into Europe., Proceedings of the National Academy of Sciences of the United States of America, 104, (39), 2007, p15276-81
Ancient DNA analysis of aurochsen in, editor(s)Alisdair Whittle , The early neolithic on the great Hungarian plain, Budapest, Instituti Archaeologici Academiae Scientairum Hungaricae, 2007, pp327 - 331, [Edwards CJ, Bradley DG]
Finlay, EK, Gaillard, C, Vahidi, SM, Mirhoseini, SZ, Jianlin, H, Qi, XB, El-Barody, MA, Baird, JF, Healy, BC, Bradley, DG, Bayesian inference of population expansions in domestic bovines., Biology letters, 3, (4), 2007, p449-52
Norton, HL, Kittles, RA, Parra, E, McKeigue, P, Mao, X, Cheng, K, Canfield, VA, Bradley, DG, McEvoy, B, Shriver, MD, Genetic evidence for the convergent evolution of light skin in Europeans and East Asians., Molecular biology and evolution, 24, (3), 2007, p710-22
Helge Täubert, Daniel G. Bradley,
Negrini, R, Nijman, IJ, Milanesi, E, Moazami-Goudarzi, K, Williams, JL, Erhardt, G, Dunner, S, Rodellar, C, Valentini, A, Bradley, DG, Olsaker, I, Kantanen, J, Ajmone-Marsan, P, Lenstra, JA, Differentiation of European cattle by AFLP fingerprinting., Animal genetics, 38, (1), 2007, p60-6
Cruz, F, Bradley, DG, Lynn, DJ, Evidence of positive selection on the Atlantic salmon CD3gammadelta gene., Immunogenetics, 59, (3), 2007, p225-32
Edwards, CJ, Bollongino, R, Scheu, A, Chamberlain, A, Tresset, A, Vigne, JD, Baird, JF, Larson, G, Ho, SY, Heupink, TH, Shapiro, B, Freeman, AR, Thomas, MG, Arbogast, RM, Arndt, B, Bartosiewicz, L, Benecke, N, Budja, M, Chaix, L, Choyke, AM, Coqueugniot, E, Döhle, HJ, Göldner, H, Hartz, S, Helmer, D, Herzig, B, Hongo, H, Mashkour, M, Ozdogan, M, Pucher, E, Roth, G, Schade-Lindig, S, Schmölcke, U, Schulting, RJ, Stephan, E, Uerpmann, HP, Vörös, I, Voytek, B, Bradley, DG, Burger, J, Mitochondrial DNA analysis shows a Near Eastern Neolithic origin for domestic cattle and no indication of domestication of European aurochs., Proceedings. Biological sciences / The Royal Society, 274, (1616), 2007, p1377-85
Bauchet, M, McEvoy, B, Pearson, LN, Quillen, EE, Sarkisian, T, Hovhannesyan, K, Deka, R, Bradley, DG, Shriver, MD, Measuring European population stratification with microarray genotype data., American journal of human genetics, 80, (5), 2007, p948-56
Lynn, DJ, Bradley, DG, Discovery of alpha-defensins in basal mammals., Developmental and comparative immunology, 31, (10), 2007, p963-7
Freeman AR, Bradley DG, Nagda S, Gibson JP, Hanotte O, Combination of multiple microsatellite data sets to investigate genetic diversity and admixture of domestic cattle. Combination of multiple microsatellite data sets to investigate genetic diversity and admixture of domestic cattle. , Animal Genetics, 37, 2006, p1 - 9
McEvoy B, Brady C, Moore LT, Bradley DG, The scale and nature of Viking settlement in Ireland from Y-chromosome admixture analysis., European Journal of Human Genetics, 14, 2006, p1288-1294
Zeder MA, Bradley DG, Emshwiller E, Smith BD, Documenting Domestication: New Genetic and Archaeological Paradigms, Berkeley and Los Angeles, California, University of California Press, 2006
Documenting domesitcation: bringing together plants, animals, archaeology and genetics. in, editor(s)Zeder MA, Bradley DG, Emshwiller E and Smith BD , Documenting Domestication: New Genetic and Archaeological Paradigms, Berkeley and Los Angeles, California, University of California Press, 2006, pp1-14 , [Zeder MA, Bradley DG, Emshwiller E and Smith BD]
Documenting domestication: reading animal genetic texts in, editor(s)Zeder MA, Bradley DG, Emshwiller E and Smith BD , Documenting Domestication: New Genetic and Archaeological Paradigms, Berkeley and Los Angeles, California, University of California Press, 2006, pp273-278 , [Bradley DG]
Moore LT, McEvoy B, Cape E, Simms K, Bradley DG., A Y-chromosome signature of hegemony in gaelic Ireland., American Journal of Human Genetics, 78, 2006, p334 - 338
Pereira F, Davis SJ, Pereira L, McEvoy B, Bradley DG, Amorim A. , Genetic signatures of a Mediterranean influence in Iberian Peninsula sheep husbandry., Molecular Biology and Evolution, 23, 2006, p1420-6
A. R. Freeman, D. G. Bradley, S. Nagda, J. P. Gibson and O. Hanotte, Combination of multiple microsatellite data sets to investigate genetic diversity and admixture of domestic cattle, Anim Genet., 37, (1), 2006, p1 - 9
McGahern AM, Edwards CJ, Bower MA, Heffernan A, Park SD, Brophy PO, Bradley DG, MacHugh DE, Hill EW, Mitochondrial DNA sequence diversity in extant Irish horse populations and in ancient horses, Animal Genetics, 37, 2006, p498-502
Bollongino R, Edwards CJ, Alt KW, Burger J, Bradley DG, Early history of European domestic cattle as revealed by ancient DNA, Biology Letters, 283, 2006, p155-159
Ryan AW, Mapp J, Moyna S, Mattiangeli V, Kelleher D, Bradley DG, McManus R, Levels of inter-population differentiation among different functional classes of immunologically important genes, Genes and Immunity, 7, (2), 2006, p179 - 183
Genetics and origins of domestic cattle in, editor(s)Zeder MA, Bradley DG, Emshwiller E and Smith BD , Documenting Domestication: New Genetic and Archaeological Paradigms, Berkeley and Los Angeles, California, University of California Press, 2006, pp317-328 , [Bradley DG and Magee DA]
Ryan AW, Mapp J, Moyna S, Mattiangeli V, Kelleher D, Bradley DG, McManus R., Levels of interpopulation differentiation among different functional classes of immunologically important genes., Genes and Immunology, 7, 2006, p179 - 183
Mattiangeli V, Ryan AW, McManus R, Bradley DG. , A genome-wide approach to identify genetic loci with a signature of natural selection in the Irish population., Genome Biology, 11, 2006, pR74
Freeman AR, Hoggart CJ, Hanotte O, Bradley DG, Assessing the relative ages of admixture in the bovine hybrid zones of Africa and the Near East using X chromosome haplotype mosaicism., Genetics, 173, 2006, p1503-10
Mattiangeli V, Ryan AW, McManus R, Bradley DG, A genome-wide approach to identify genetic loci with a signature of natural selection in the Irish population, Genome Biology, 7, (8), 2006, pR74-
Zeder MA, Emshwiller E, Smith BD, Bradley DG. , Documenting domestication: the intersection of genetics and archaeology., Trends in Genetics, 22, 2006, p139-55
McEvoy B, Bradley DG, Y-chromosomes and the extent of patrilineal ancestry in Irish surnames., Human Genetics, 119, 2006, p212-9
Pereira L, Richards M, Goios A, Alonso A, Albarran C, Garcia O, Behar DM, Golge M, Hatina J, Al-Gazali L, Bradley DG, Macaulay V, Amorim A., High-resolution mtDNA evidence for the late-glacial resettlement of Europe from an Iberian refugium., Genome Research, 15, 2005, p19 - 24
Lynn DJ, Freeman AR, Murray C, Bradley DG., A genomics approach to the detection of positive selection in cattle: adaptive evolution of the T-cell and natural killer cell-surface protein CD2, Genetics, 170, 2005, p1189-96
Gotherstrom A, Anderung C, Hellborg L, Elburg R, Smith C, Bradley DG, Ellegren H., Cattle domestication in the Near East was followed by hybridization with aurochs bulls in Europe., Proceedings of the Royal Society Series B, 22, 2005, p2337-44
Teresa Cymbron, Abigail R. Freeman*, M. Isabel Malheiro, Jean-Denis Vigne and Daniel G. Bradley, Microsatellite diversity suggests different histories for Mediterranean and Northern European cattle populations, Proc Biol Sci. B, 272, (1574), 2005, p1837 - 1843
Lister AM, Edwards CJ, Nock DA, Bunce M, van Pijlen IA, Bradley DG, Thomas MG, Barnes I., The phylogenetic position of the 'giant deer' Megaloceros giganteus., Nature, 438, 2005, p850 - 853
Pereira F, Pereira L, Van Asch B, Bradley DG, Amorim A., The mtDNA catalogue of all Portuguese autochthonous goat (Capra hircus) breeds: high diversity of female lineages at the western fringe of European distribution., Molecular Ecology, 14, 2005, p2313-8
David J. Lynn, Abigail R Freeman, Caitríona Murray, Daniel G. Bradley, A Genomics Approach to the Detection of Positive Selection in Cattle:, Genetics, 170, (3), 2005, p1189 - 1196, p1189-1196
Götherström, A, Anderung, C, Hellborg, L, Elburg, R, Smith, C, Bradley, DG, Ellegren, H, Cattle domestication in the Near East was followed by hybridization with aurochs bulls in Europe., Proceedings. Biological sciences / The Royal Society, 272, (1579), 2005
Cymbron T, Freeman AR, Isabel Malheiro M, Vigne JD, Bradley DG., Microsatellite diversity suggests different histories for Mediterranean and Northern European cattle populations., Proceedings of the Royal Society Series B, 7, 2005, p1837-43
Pereira L, Richards M, Goios A, Alonso A, Albarran C, Garcia O, Behar DM, Golge M, Hatina J, Al-Gazali L, Bradley DG, Macaulay V, Amorim A., Evaluating the forensic informativeness of mtDNA haplogroup H sub-typing on a Eurasian scale., Forensic Science International, 159, 2005, p43 - 50
Dolan C, O'Halloran A, Bradley DG, Croke DT, Evans A, O'Brien JK, Dicker P, Shields DC., Genetic stratification of pathogen-response-related and other variants within a homogeneous Caucasian Irish population., European Journal of Human Genetics, 13, (7), 2005, p798 - 806
B. McEvoy, M. Richards, P. Forster and D. G. Bradley, The longue duree of genetic ancestry: multiple genetic marker systems and celtic origins on the atlantic facade of europe, American journal of human genetics, 75, (4), 2004, p693-702
Freeman AR, Meghan CM, MacHugh DE, Loftus RT, Achukwi MD, Bado A, Sauveroche B & Bradley DG, Admixture and diversity in West African cattle populations, Mol Ecol., 13, (11), 2004, p3477 - 3487
Mannen H, Kohno, M., Nagata, Y., Tsuji, S., Bradley, D. G., Yeo, J. S., Nyamsamba, D., Zagdsuren, Y., Yokohama, M., Nomura, K. and Amano, T. , Independent Mitochondrial Origin and Historical Genetic Differentiation of North Eastern Asian Cattle, Molecular Phylogenetics and Evolution , 32 (2), (AUG), 2004, p539 - 544
Edwards C.J. MacHugh D.E., Dobney K.M., Martin L., Russell N., Horwitz L.K., McIntosh S.K., MacDonald K.C., Helmer D., Tresset A., Vigne J.-D. & Bradley D.G, Ancient DNA analysis of 101 cattle remains: limits and prospects, Journal of Archaeological Science, 31 (6) , (JUN), 2004, p695 - 710
Brian McEvoy, Martin Richards, Peter Forster, Daniel G. Bradley, The Longue Durée of Genetic Ancestry: Multiple Genetic Marker Systems and Celtic Origins on the Atlantic Facade of Europe, The American Journal of Human Genetics, 75, (4), 2004, p693 - 702, p693-702
O'Mahony EM, Bradley DG, Kennedy CR, Holland CV, Evidence for the hypothesis of strain formation in Pomphorhynchus laevis (Acanthocephala): an investigation using mitochondrial DNA sequences, PARASITOLOGY, 129: Part 3, (SEP), 2004, p341 - 347
Freeman AR, Meghen CM, Machugh DE, Loftus RT, Achukwi MD, Bado A, Sauveroche B, Bradley DG., Admixture and diversity in West African cattle populations., Molecular Ecology, 13, 2004, p3477-87
Bradley DG , Genetic hoofprints, Natural History , 112, 2003, p36 - 41
P. Kumar, A. R. Freeman, R. T. Loftus, C. Gaillard, D. Q. Fuller and D. G. Bradley, Admixture analysis of South Asian cattle, Heredity, 91, (1), 2003, p43-50
C. J. Edwards, J. Connellan, P. F. Wallace, S. D. Park, F. M. McCormick, I. Olsaker, E. Eythorsdottir, D. E. MacHugh, J. F. Bailey and D. G. Bradley, Feasibility and utility of microsatellite markers in archaeological cattle remains from a Viking Age settlement in Dublin, Animal genetics, 34, (6), 2003, p410-6
Bruford MW, Bradley DG and Luikart G, DNA markers reveal the complexity of livestock domestication, Nature Reviews Genetics , 4, 2003, p900 - 910
Beja-Pereira A, Luikart G, England PR, Bradley DG, Jann OC, Bertorelle G, Chamberlain AT, Nunes TP, Metodiev S, Ferrand N, Erhardt G., Gene-culture coevolution between cattle milk protein genes and human lactase genes, Nature Genetics, 35, 2003, p311 - 313
HANOTTE, O, AFRICAN PASTORALISM: GENETIC IMPRINTS OF ORIGINS AND MIGRATIONS, SCIENCE, 296, 2002, p336 - 339
Hill E.W., Bradley D.G., El-Barody M.A., Ertugrul O., Splan R.K., Zakharov I. & Cunningham E.P., History and integrity of thoroughbred dam lines revealed in equine mtDNA variation, Animal Genetics, 33, 2002, p287 - 294
HILL, EW, BRADLEY, DG, AL-BARODY, M, ERTUGRUL, O, SPLAN, RK, ZAKHAROV, I, CUNNINGHAM, EP, HISTORY AND INTEGRITY OF THOROUGHBRED DAM LINES REVEALED IN EQUINE MTDNA VARIATION, ANIMAL GENETICS, 33, 2002, p287 - 294
Genetic variation of mitochondrial DNA variation within domestic yak populations. in, editor(s)H Jianlin, C Richard, O. Hanotte, C McVeigh and JEO Rege. , Yak production in central Asian highlands, Nairobi, ILRI, 2002, pp181 - 189, [Bailey JF, Healy B, Jianlin H, Serchand L, Pradhan SL, Tsendsuren T, Foggin JM, Gaillard G, Steane D, Zakharov and Bradley DG]
Magee DA, Meghen C, Harrison S, Troy CS, Cymbron T, Gaillard C, Morrow A, Maillard JC and Bradley DG, A partial African ancestry for the Creole cattle populations of the Caribbean, Journal of Heredity , 93, 2002, p429 - 432
Olivier Hanotte, Daniel G. Bradley, Joel W. Ochieng, Yasmin Verjee, Emmeline W. Hill, J.E.O. Rege, African Pastoralism: Genetic Imprints of Origins and Migrations, Science, 296, (5566), 2002, p336 - 339, p336-339
A. R. Freeman, D. E. MacHugh, S. McKeown, C. Walzer, D. J. McConnell and D. G. Bradley, Sequence variation in the mitochondrial DNA control region of wild African cheetahs (Acinonyx jubatus), Heredity, 86, (Pt 3), 2001, p355-62
C. S. Troy, D. E. MacHugh, J. F. Bailey, D. A. Magee, R. T. Loftus, P. Cunningham, A. T. Chamberlain, B. C. Sykes and D. G. Bradley, Genetic evidence for Near-Eastern origins of European cattle, Nature, 410, (6832), 2001, p1088-91
MacHugh DE, Bradley DG., Livestock genetic origins: goats buck the trend., Proceedings of the National Academy of Sciences, USA, 98, 2001, p5382-4
E. P. Cunningham, J. J. Dooley, R. K. Splan and D. G. Bradley, Microsatellite diversity, pedigree relatedness and the contributions of founder lineages to thoroughbred horses, Animal genetics, 32, (6), 2001, p360-4
Y chromosomes and Irish origins in, editor(s)Renfrew, C.A. & Boyle, K , Archaeogenetics: DNA and the population prehistory of Europe, Cambridge, UK, McDonald Institute Monographs, 2000, ppChapter 22 , [Hill EW, Jobling MA & Bradley DG]
LOFTUS, RT, ERTUGRUL, O, HARBA, AH, EL-BARODY, MAA, MACHUGH, DE, PARK, SDE, BRADLEY, DG, A MICROSATELLITE SURVEY OF CATTLE FROM A CENTRE OF ORIGIN: THE NEAR EAST, MOLECULAR ECOLOGY, 8, 2000, p2015 - 2022
E. W. Hill, M. A. Jobling and D. G. Bradley, Y-chromosome variation and Irish origins, Nature, 404, (6776), 2000, p351-2
Zoë H. Rosser, Tatiana Zerjal, Matthew E. Hurles, Maarja Adojaan, Dragan Alavanti", António Amorim, William Amos, Manuel Armenteros, Eduardo Arroyo"Pardo, Guido Barbujani, G. Beckman, L. Beckman, Jaume Bertranpetit, Elena Bosch, Daniel G. Bradley, Gaute Brede, Gillian Cooper, Helena B.S.M. Côrte-Real, Peter de Knijff, Ronny Decorte, Yuri E. Dubrova, Oleg V. Evgrafov, Anja Gilissen, Sanja Gliši", Mukaddes Gölge, Emmeline W. Hill, Anna Jeziorowska, Luba Kalaydjieva, Manfred Kayser, Toomas Kivisild, ". ". """"""""", Astr"da Kr"mi"a, Vaidutis Ku"inskas, João Lavinha, ". ". """""", Patrizia Malaspina, Syrrou Maria, Ken McElreavey, Thomas Meitinger, Aavo"Valdur Mikelsaar, R.J. Mitchell, Khédoudja Nafa, Jayne Nicholson, Søren Nørby, Arpita Pandya, Jüri Parik, Philippos C. Patsalis, Lu""sa Pereira, Borut Peterlin, Gerli Pielberg, Maria João Prata, Carlo Previderé, Lutz Roewer, Siiri Rootsi, David C. Rubinsztein, Juliette Saillard, Fabrício R. Santos, Gheorghe "tef"nescu, Bryan Sykes, Asl"han Tolun, Richard Villems, Chris Tyler"Smith, Mark A. Jobling, Y-Chromosomal Diversity in Europe Is Clinal and Influenced Primarily by Geography, Rather than by Language, The American Journal of Human Genetics, 67, (6), 2000, p1526 - 1543, p1526-1543
C. J. Edwards, C. Gaillard, D. G. Bradley and D. E. MacHugh, Y-specific microsatellite polymorphisms in a range of bovid species, Animal genetics, 31, (2), 2000, p127-30
Olivier Hanotte, C. L. Tawah, Daniel G. Bradley, M A Okomo, Yasmin Verjee, Joel W. Ochieng, J.E.O. Rege, Geographic distribution and frequency of a taurine Bos taurus and an indicine Bos indicus Y specific allele amongst sub"Saharan African cattle breeds, Molecular Ecology, 9, (4), 2000, p387 - 396, p387-396
Ceiridwen J. Edwards, Charlotte Gaillard, Daniel G. Bradley, David E. MacHugh, Y"specific microsatellite polymorphisms in a range of bovid species, Animal Genetics, 31, (2), 2000, p127 - 130, p127-130
Agnar Helgason, Sigrún Sigurðardóttir, Jayne Nicholson, Bryan Sykes, Emmeline W. Hill, Daniel G. Bradley, Vidar Bosnes, Jeffery R. Gulcher, Ryk Ward, K"ri Stefánsson, Estimating Scandinavian and Gaelic Ancestry in the Male Settlers of Iceland, The American Journal of Human Genetics, 67, (3), 2000, p697 - 717, p697-717
HANOTTE, O, TAWAH, CL, BRADLEY, DG, OKOMO, M, VERJEE, Y, OCHIENG, J, REGE, JEO, GEOGRAPHIC DISTRIBUTION AND FREQUENCY OF A TAURINE BOS TAURUS AND AN INDICINE BOS INDICUS Y SPECIFIC ALLELE AMONGST SUB-SAHARAN AFRICAN CATTLE BREEDS, MOLECULAR ECOLOGY, 9, 2000, p387 - 396
NORRIS, AT, BRADLEY, DG, CUNNINGHAM, EP, PARENTAGE AND RELATEDNESS DETERMINATION IN FARMED ATLANTIC SALMON (SALMO SALAR) USING MICROSATELLITE MARKERS, AQUACULTURE, 182, 2000, p73 - 83
HELGASON, A, SIGUROARDOTTIR, S, NICHOLSON, J, SYKES, B, HILL, EW, BRADLEY, DG, BOSNES, V, GULCHER, JR, WARD, R, STEFANSSON, K, ESTIMATING SCANDINAVIAN AND GAELIC ANCESTRY IN THE MALE SETTLERS OF ICELAND, AMERICAN JOURNAL OF HUMAN GENETICS, 67, 2000, p697 - 717
C. J. Edwards, G. Dolf, C. Looft, R. T. Loftus and D. G. Bradley, Relationships between the endangered Pustertaler-Sprinzen and three related European cattle breeds as analysed with 20 microsatellite loci, Animal genetics, 31, (5), 2000, p329-32
ROSSER, ZH, ZERJAL, T, HURLES, ME, ADOJAAN, M, ALAVANTIC, D, AMORIM, A, AMOS, W, ARMENTEROS, M, ARROYO, E, BARBUJANI, G, BECKMAN, G, BECKMAN, L, BERTRANPETIT, J, BOSCH, E, BRADLEY, DG, BREDE, G, COOPER, G, CORTE-REAL, HBSM, DE KNIJFF, P, DECORTE, R, DUBROVA, YE, EVGRAFOV, O, GILISSEN, A, GLISIC, S, GOLGE, M, HILL, EW, JEZIOROWSKA, A, KALAYDJIEVA, L, KAYSER, M, KIVISILD, T, KRAVCHENKO, SA, KRUMINA, A, KUCINSKAS, V, LAVINHA, J, LIVSHITS, LA, MALASPINA, P, MARIA, S, MCELREAVEY, K, MEITINGER, TA, MIKELSAAR, AV, MITCHELL, RJ, NAFA, K, NICHOLSON, J, NORBY, S, PANDYA, A, PARIK, J, PATSALIS, PC, PEREIRA, L, PETERLIN, B, PIELBERG, G, PRATA, ML, PREVIDERE, C, ROEWER, L, ROOTSI, S, RUBINSZTEIN, DC, SAILLARD, J, SANTOS, FR, STEFANESCU, G, SYKES, BC, TOLUN, A, VILLEMS, R, TYLER-SMITH, C, JOBLING, MA, Y-CHROMOSOMAL DIVERSITY IN EUROPE IS CLINAL AND INFLUENCED PRIMARILY BY GEOGRAPHY, RATHER THAN BY LANGUAGE, AMERICAN JOURNAL OF HUMAN GENETICS, 67, 2000, p1526 - 1543
Richards M, Macaulay V, Hickey E, Vega E, Sykes B, Guida V, Rengo C, Sellitto D, Cruciani F, Kivisild T, Villems R, Thomas M, Rychkov S, Rychkov O, Rychkov Y, Golge M, Dimitrov D, Hill E, Bradley D, Romano V, Cali F, Vona G, Demaine A, Papiha S, Triantaphyllidis C & Stefanescu G. , Tracing European founder lineages in the Near Eastern mtDNA pool, American Journal of Human Genetics, 67, (5), 2000, p125 - 1276
Ashie Norris, Daniel G. Bradley, E. P. Cunningham, Parentage and relatedness determination in farmed Atlantic salmon (Salmo salar) using microsatellite markers, Aquaculture, 182, (1-2), 2000, p73 - 83, p73-83
Mitochondrial DNA diversity and the origins of domestic livestock in Archaeogenetics: DNA and the population history of Europe. in, editor(s)C. Renfrew and K Boyle , McDonald Institute Monographs., 2000, [Bradley DG ]
Ashie Norris, Daniel G. Bradley, E. P. Cunningham, Microsatellite genetic variation between and within farmed and wild Atlantic salmon (Salmo salar) populations, Aquaculture, 180, (3-4), 1999, p247 - 264, p247-264
Systematics and phylogeny of cattle in, editor(s)R Fries and A Ruvinsky , The genetics of cattle, Wallingford, UK., CAB International, 1999, [Lenstra, J. A. and Bradley, D. G.]
Characterisation of the Kuri cattle of Lake Chad using molecular genetic techniques in, editor(s).M. Blench and K.C. MacDonald , Origin and Development of African livestock, UCL Press, 1999, [Meghen, C, MacHugh DE, Sauveroche B, Kana G, Bradley DG]
NORRIS, AT, BRADLEY, DG, CUNNINGHAM, EP, MICROSATELLITE GENETIC VARIATION BETWEEN AND WITHIN FARMED AND WILD ATLANTIC SALMON (SALMO SALAR) POPULATIONS, AQUACULTURE, 180, 1999, p247 - 264
CYMBRON, T, LOFTUS, RT, MALHEIRO, MI, BRADLEY, DG, MITOCHONDRIAL SEQUENCE VARIATION SUGGESTS AN AFRICAN INFLUENCE IN PORTUGUESE CATTLE, PROCEEDINGS OF THE ROYAL SOCIETY OF LONDON SERIES B-BIOLOGICAL SCIENCES, 266, 1999, p597 - 603
R. T. Loftus, O. Ertugrul, A. H. Harba, M. A. El-Barody, D. E. MacHugh, S. D. Park and D. G. Bradley, A microsatellite survey of cattle from a centre of origin: the Near East, Molecular ecology, 8, (12), 1999, p2015-22
MACHUGH, DE, TROY, CS, MCCORMICK, F, OLSAKER, I, EYTHORSDOTTIR, E, BRADLEY, DG, EARLY MEDIEVAL CATTLE REMAINS FROM A SCANDINAVIAN SETTLEMENT IN DUBLIN: GENETIC ANALYSIS AND COMPARISON WITH EXTANT BREEDS, PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY OF LONDON SERIES B-BIOLOGICAL SCIENCES, 354, 1999, p99 - 108
D. E. MacHugh, C. S. Troy, F. McCormick, I. Olsaker, E. Eythorsdottir and D. G. Bradley, Early medieval cattle remains from a Scandinavian settlement in Dublin: genetic analysis and comparison with extant breeds, Philosophical transactions of the Royal Society of London Series B, Biological sciences, 354, (1379), 1999, p99-108; discussion 108-9
PARK, SDE, ADOMEFA, K, DAO, B, HANOTTE, O, KEMP, SJ, SOW, R, TEALE, AJ, BRADLEY, DG, APPLICATION OF POPULATION GENETIC ANALYSIS OF LINKED, MAPPED MICROSATELLITES TO THE IDENTIFICATION OF LOCI UNDER SELECTION FOR DISEASE RESISTANCE, ARCHIV FUR TIERZUCHT-ARCHIVES OF ANIMAL BREEDING, 42, 1999, p97 - 99
Teresa Cymbron, Ronan T. Loftus, Isabel Malheiro, Daniel G. Bradley, Mitochondrial sequence variation suggests an African influence in Portuguese cattle, Proceedings of the Royal Society B Biological Sciences, 266, (1419), 1999, p597 - 603, p597-603
Genetic aspects of domestication, common breeds and their origins in, editor(s)R Fries and A Ruvinsky , The genetics of cattle, Wallingford, UK, CAB International, 1999, [Bradley, DG and Cunningham P]
NIJMAN, IJ, BRADLEY, DG, HANOTTE, O, OTSEN, M, LENSTRA, JA, SATELLITE DNA POLYMORPHISMS AND AFLP CORRELATE WITH BOS INDICUS-TAURUS HYBRIDIZATION, ANIMAL GENETICS, 30, 1999, p265 - 273
BRADLEY, DG, LOFTUS, RT, CUNNINGHAM, P, MACHUGH, DE, GENETICS AND DOMESTIC CATTLE ORIGINS, EVOLUTIONARY ANTHROPOLOGY, 6, 1998, p79 - 86
Hideyuki Mannen, S. Tsuji, R T Loftus, Daniel G. Bradley, Mitochondrial DNA Variation and Evolution of Japanese Black Cattle (Bos taurus), Genetics, 150, (3), 1998, p1169 - 1175, p1169-1175
ACHUKWI, MD, TANYA, VN, HILL, EW, BRADLEY, DG, MEGHEN, C, SAUVEROCHE, B, BANSER, JT, NDOKI, JN, SUSCEPTIBILITY OF THE NAMCHI AND KAPSIKI CATTLE OF CAMEROON TO TRYPANOSOME INFECTION, TROPICAL ANIMAL HEALTH AND PRODUCTION, 29, 1998, p219 - 226
MANNEN, H, TSUJI, S, LOFTUS, RT, BRADLEY, DG, MITOCHONDRIAL DNA VARIATION AND EVOLUTION OF JAPANESE BLACK CATTLE (BOS TAURUS), GENETICS, 150, 1998, p1169 - 1175
D. E. MacHugh, R. T. Loftus, P. Cunningham and D. G. Bradley, Genetic structure of seven European cattle breeds assessed using 20 microsatellite markers, Animal genetics, 29, (5), 1998, p333-40
Mbunkah Daniel Achukwi, Vincent N. Tanya, Emmeline W. Hill, Daniel G. Bradley, C. Meghen, B. Sauveroche, J. T. Banser, J. N. Ndoki, Susceptibility of the namchi and kapsiki cattle of cameroon to trypanosome infection, Tropical Animal Health and Production, 29, (4), 1997, p219 - 226, p219-226
D. E. MacHugh, M. D. Shriver, R. T. Loftus, P. Cunningham and D. G. Bradley, Microsatellite DNA variation and the evolution, domestication and phylogeography of taurine and zebu cattle (Bos taurus and Bos indicus), Genetics, 146, (3), 1997, p1071-86
D. G. Bradley, D. E. MacHugh, P. Cunningham and R. T. Loftus, Mitochondrial diversity and the origins of African and European cattle, Proceedings of the National Academy of Sciences of the United States of America, 93, (10), 1996, p5131-5
BAILEY, JF, RICHARDS, MB, MACAULAY, VA, COLSON, IB, JAMES, IT, BRADLEY, DG, HEDGES, REM, SYKES, BC, ANCIENT DNA SUGGESTS A RECENT EXPANSION OF EUROPEAN CATTLE FROM A DIVERSE WILD PROGENITOR SPECIES, PROCEEDINGS OF THE ROYAL SOCIETY OF LONDON SERIES B-BIOLOGICAL SCIENCES, 263, 1996, p1467 - 1473
Bradley DG, MacHugh DE, Cunningham P, Loftus RT, Mitochondrial diversity and the origins of African and European cattle., Proceedings of the National Academy of Sciences of the United States of America, 93, (10), 1996, p5131-5
Stephen J. G. Hall, Daniel G. Bradley, Conserving livestock breed biodiversity, Trends in Ecology & Evolution, 10, (7), 1995, p267 - 270, p267-270
HALL, SJG, BRADLEY, DG, CONSERVING LIVESTOCK BREED BIODIVERSITY, TRENDS IN ECOLOGY & EVOLUTION, 10, 1995
A.J. Teale, J Wambugu, Paul Gwakisa, G. Stranzinger, Daniel G. Bradley, Stephen J. Kemp, A polymorphism in randomly amplified DNA that differentiates the Y chromosomes of Bos indicus and Bos taurus, Animal Genetics, 26, (4), 1995, p243 - 248, p243-248
Meghen, C., MacHugh, D.E. and Bradley, D.G. , Genetic Chracterisation and West African Cattle, World Animal Review., 78, 1994, p59 - 66
R. T. Loftus, D. E. MacHugh, D. G. Bradley, P. M. Sharp and P. Cunningham, Evidence for two independent domestications of cattle, Proceedings of the National Academy of Sciences of the United States of America, 91, (7), 1994, p2757-61
D. E. Machugh, R. T. Loftus, D. G. Bradley, P. M. Sharp and P. Cunningham, Microsatellite DNA variation within and among European cattle breeds, Proceedings of the Royal Society of London Series B Biological sciences, 256, (1345), 1994, p25-31
D. G. Bradley, D. E. MacHugh, R. T. Loftus, R. S. Sow, C. H. Hoste and E. P. Cunningham, Zebu-taurine variation in Y chromosomal DNA: a sensitive assay for genetic introgression in west African trypanotolerant cattle populations, Animal genetics, 25, (1), 1994, p07-Dec
R. T. Loftus, D. E. MacHugh, L. O. Ngere, D. S. Balain, A. M. Badi, D. G. Bradley and E. P. Cunningham, Mitochondrial genetic variation in European, African and Indian cattle populations, Animal genetics, 25, (4), 1994, p265-71
HEALY, JMS, HEFFRON, JJA, LEHANE, M, BRADLEY, DG, JOHNSON, K, MCCARTHY, TV, DIAGNOSIS OF SUSCEPTIBILITY TO MALIGNANT HYPERTHERMIA WITH FLANKING DNA MARKERS, BRITISH MEDICAL JOURNAL, 303, 1991, p1225 - 1228
R. Kumar-Singh, D. G. Bradley, G. J. Farrar, M. Lawler, S. A. Jordan and P. Humphries, Autosomal dominant retinitis pigmentosa: a new multi-allelic marker (D3S621) genetically linked to the disease locus (RP4), Human genetics, 86, (5), 1991, p502-4
M. M. Humphries, D. Sheils, M. Lawler, G. J. Farrar, P. McWilliam, P. Kenna, D. G. Bradley, E. M. Sharp, E. F. Gaffney, M. Young and et al., Epidermolysis bullosa: evidence for linkage to genetic markers on chromosome 1 in a family with the autosomal dominant simplex form, Genomics, 7, (3), 1990, p377-81
G. J. Farrar, P. McWilliam, D. G. Bradley, P. Kenna, M. Lawler, E. M. Sharp, M. M. Humphries, H. Eiberg, P. M. Conneally, J. A. Trofatter and et al., Autosomal dominant retinitis pigmentosa: linkage to rhodopsin and evidence for genetic heterogeneity, Genomics, 8, (1), 1990, p35-40
G. J. Farrar, P. Kenna, R. Redmond, P. McWilliam, D. G. Bradley, M. M. Humphries, E. M. Sharp, C. F. Inglehearn, R. Bashir, M. Jay and et al., Autosomal dominant retinitis pigmentosa: absence of the rhodopsin proline----histidine substitution (codon 23) in pedigrees from Europe, American journal of human genetics, 47, (6), 1990, p941-5
G. J. Farrar, P. McWilliam, E. M. Sharp, P. Kenna, D. G. Bradley, M. M. Humphries, D. J. McConnell and P. Humphries, Autosomal dominant retinitis pigmentosa: exclusion of a gene from extensive regions of chromosomes 6, 13, 20, and 21, Genomics, 5, (3), 1989, p612-8
D. G. Bradley, G. J. Farrar, E. M. Sharp, P. Kenna, M. M. Humphries, D. J. McConnell, S. P. Daiger, P. McWilliam and P. Humphries, Autosomal dominant retinitis pigmentosa: exclusion of the gene from the short arm of chromosome 1 including the region surrounding the rhesus locus, American journal of human genetics, 44, (4), 1989, p570-6
P. McWilliam, G. J. Farrar, P. Kenna, D. G. Bradley, M. M. Humphries, E. M. Sharp, D. J. McConnell, M. Lawler, D. Sheils, C. Ryan and et al., Autosomal dominant retinitis pigmentosa (ADRP): localization of an ADRP gene to the long arm of chromosome 3, Genomics, 5, (3), 1989, p619-22
Daiger S P, Humphries M M, Giesenschlag N, Sharp E M, McWilliam P, Farrar G J, Bradley D G, McConnell D J, Kenna P, Sparkes R S, Spence M A, Heckenlively J R and Humphries P , Linkage analysis of human chromosome 4: exclusion of autosomal dominant retinitis pigmentosa and detection of new linkage groups, Cytogenetics. and Cell Genetics, 50, 1989, p181 - 187
S. P. Daiger, M. M. Humphries, N. Giesenschlag, E. Sharp, P. McWilliam, J. Farrer, D. Bradley, P. Kenna, D. J. McConnell, R. S. Sparkes and et al., Linkage analysis of human chromosome 4: exclusion of autosomal dominant retinitis pigmentosa (ADRP) and detection of new linkage groups, Cytogenetics and cell genetics, 50, (4), 1989, p181-7
Non-Peer-Reviewed Publications
Oxen, Grolier Encyclopedia New Book of Knowledge, 2003, [Bradley DG ]
Bradley DG and Hill EW, Whats in a surname, Archaeology Ireland , 14, 2000, p22 - 23
Designing life: the role of inheritance in, editor(s)M. Jumker-Kenny , Designing life? Genetics, procreation and ethics, Aldershot, Ashgate Publishing Ltd, 1999, [Bradley DG]
Loftus R.T., D.E. MacHugh, P. Cunningham and D.G. Bradley, Animal domestication [letter], Science, 283, 1999, p329-30
Loftus RT, D.G. Bradley, D.E. MacHugh, C.S. Troy, C.N. Meghen and E.P. Cunningham , Molecular genetics and the evolution of domesticated cattle, 8th World Conference on Animal Production, 1, 1998, pp144 - 145
Meghen, C. N., Scott, C. S., Bradley, D. G., MacHugh, D. E., Loftus, R. T. and Cunningham, E. P. , DNA based traceability for the meat industry, 8th World Conference on Animal Production, 1998, pp774 - 775
Bradley, DG and O'Sullivan, M., Tracing our ancient ancestors., Archaeology Ireland , 39, 1997, p18 - 20
McHugh, D. E., Loftus, R. T., Troy, C. S. and Bradley, D. G. , DNA Analysis and the origins and history of domesticated cattle, Archaeology of Southwest Asia (ASWA) conference, Budapest, 1996
Bradley, D. G., Loftus, R. T., MacHugh, D. E. and Cunningham, P., The Molecular Evolution of Domestic cattle, Symposium on Mediterranean Animal Germplasm and Future Human Challenges, Salerno, 1996
Cunningham, E. P., Loftus, R. T., MacHugh, D. E., Bradley, D. G., Molecular evolution of African, European and Asian Cattle, 21, 5th World Congress on Genetics Applied to Livestock Production, 1994, pp86 - 89
An integrated global programme to establish the genetic relationships among the breeds of each domestic animal species in, Report of a working group, Rome, FAO , 1993, [Barker JSF, Bradley DG, Fries R, Hill WG, Nei M, and Wayne RK]
Bradley, DG, MacHugh, DE, Loftus, RT, Meghen, C, Sharp, PM, Cunningham, EP, ) Genetic Characterisation of Indigenous Cattle Breeds: First Results and Implications for Genetic Improvement, FAO Animal Production and Health Paper , 110, 1993, p37 - 45
Bradley, D. G, Genetic characterisation of cattle breeds in West and Central Africa, Trypanotolerant Livestock Newsletter , 5, 1992, p3 - 8
Research Expertise
Description
I have active research in: ancient genomic analysis of western European humans, particularly Irish archaeological remains; ancient genomes of cattle sheep and goat.Projects
- Title
- AncestralWeave: 1000 ancient genomes: gene-economy innovation in cattle, sheep and goat
- Summary
- The genetic threads of goat, cattle and sheep ancestry have been woven by human breeding, environmental pressures, hybridisation and the chance effects of genetic drift. The ancestral weaves of these key animals intertwine with human creativity in the most profoundly innovative episodes of the human past. Three broad episodes of particular import were: initial domestications circa 11 kya in Southwest Asia; the intensification circa 6 kya of use of those animal products which are harvested without killing such as wool, milk and traction; and the development of exceptionally productive landraces, later formalized into breeds, in recent millennia. However, each of these is loosely defined in time and space, the key traits are often osteologically invisible, and the vectors of causality in their virtuous cycles of gene-economy innovation are completely unknown. A combination of high coverage ancient whole genome data coupled with new analysis methods that allow efficient computation of genomewide locus genealogies will be used to untangle the threads of ancestry in sheep, cattle and goat across the whole genome in these transformative phases. Combining these with additional low coverage genomes generated from less preserved samples will generate a total set of 1,000 ancient animal genomes. These data will be unprecedented and will allow tracking of selection at trait genes, in order to detect human agency in breeding and, in collaboration with archaeologist partners, asking are there periods and places where threads of innovation coalesce. The project will also use ancient epigenetics to explore archaeological variation in gene activation patterns and will seek to understand the problematic build up of harmful mutations that threaten livestock today. With cognate disciplines, it will compare signals of animal mobility identifying distinct genetic strata correlating with archaeological horizons and affording the prospect of DNA-dating in future excavation.
- Funding Agency
- European Research Council
- Date From
- December 2020
- Date To
- November 2025
Recognition
Representations
Member of a Wellcome Trust Panel responsible for the disbursement of research funds in Bioarchaeology
Appointed to Editorial Board of the international journal, Animal Genetics
Five times juror in the European Contest for Young Scientists
Member of the Royal Irish Academy Advisory Committee on Genetic Anthropology
Served as an expert consultant on genetic distance and biodiversity to the Food and Agriculture Organisation of the United Nations
Member, PHG Funded PI's and Researchers, All Researchers funded under Cycle 3 PRTLI - Programme for Human Genomics
Awards and Honours
TCD Fellowship
CGIAR award for outstanding scientific article
Member of the Royal Irish Academy
Royal Irish Academy Gold Medal in the Life Sciences
Memberships
Member of International Society of Animal Genetics
former President of Irish Society of Human Genetics