Skip to main content

Trinity College Dublin, The University of Dublin

Trinity Menu Trinity Search



You are here Histopathology > Our Research > Publications

Our Publications

Show: AllPeer ReviewedNon Peer Reviewed
43 publications from 2014

Margaret O"Brien, Jane Cryan, Francesca Brett, Rachel Howley, Michael Farrell, Ten years on: Genetic screening for mitochondrial disease in Ireland, Clinical Neuropathology, 33, (07), 2014, p279--283
Journal Article; Published; Peer Reviewed; Author Profile: BRETTF

Linda Mulligan, Elizabeth Ryan, Margaret O"Brien, Seamus Looby, Josephine Heffernan, Joanne O"Sullivan, Mary Clarke, Patrick Buckley, David O"Brien, Michael Farrell, Francesca Mary Brett, Genetic features of oligodendrogliomas and presence of seizures. The relationship of seizures and genetics in LGOs, Clinical Neuropathology, 33, (07), 2014, p292--298
Journal Article; Published; Peer Reviewed; Author Profile: BRETTF

Uwineza A, Gill H, Buckley P, Owens C, Capra M, O'Sullivan C, McDermott M, Brett F, Farrell M, Pears J, O'Sullivan MJ., Rhabdoid tumor: the Irish experience 1986-2013., Cancer genetics, 207, (9), 2014, p398-402
Journal Article; Published; Peer Reviewed; Author Profiles: BRETTF MCAPRA ; DOI

Tchrakian N, Nehhozina T, Daly L, Flavin R, Quantitative image analysis of the MIB-1 proliferation index in non Hodgkin Lymphoma and its correlation with semiquantitated values and survival , 2014, 465 , SPRINGER 233 SPRING ST, NEW YORK, NY 10013 USA , 2014, ppS271 - S272
Conference Paper; Published; Peer Reviewed; Author Profile: FLAVINR

Elhassadi E, Flavin R, Browne P, Hayden P, Higgins L, Vanderberghe E, TRANSFORMED FOLLICULAR LYMPHOMA TREATMENT OUTCOME DURING THE RITUXIMAB ERA , 2014, 99 , FERRATA STORTI FOUNDATION VIA GIUSEPPE BELLI 4, 27100 PAVIA, ITALY , 2014, pp706 - 706
Conference Paper; Published; Peer Reviewed; Author Profile: FLAVINR

Levanon, K., Sapoznik, S., Bahar-Shany, K., Brand, H., Shapira-Frommer, R., Korach, J., Hirsch, M.S., Roh, M.H., Miron, A., Liu, J.F., Vena, N., Ligon, A.H., Fotheringham, S., Bailey, D., Flavin, R.J., Birrer, M.J., Drapkin, R.I., FOXO3a loss is a frequent early event in high-grade pelvic serous carcinogenesis, Oncogene, 33, (35), 2014, p4424-4432
Journal Article; Published; Peer Reviewed; Author Profile: FLAVINR

Selvarajah S, Pyne S, Chen E, Sompallae R, Ligon AH, Nielsen GP, Dranoff G, Stack E, Loda M, Flavin R, High-resolution array CGH and gene expression profiling of alveolar soft part sarcoma., Clinical cancer research : an official journal of the American Association for Cancer Research, 2014
Journal Article; Published; Peer Reviewed; Author Profile: FLAVINR

Glynn M, Kirby D, Nwankire C, Kinahan D, Spillane C, Shiels O, O'Leary J, Ducrée J, Staging the clinical status from blood of cancer patients by chip-based cell enumeration following targetted removal of normal cells, 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2014, 2014, 2014, pp461 - 463
Conference Paper; Published; Peer Reviewed; Author Profile: OLEARYJJ; URL

O'Connor M, Costello L, Murphy J, Prendiville W, Martin C.M, O'Leary J.J, Sharp L, 'I don't care whether it's HPV or ABC, i just want to know if i have cancer.' Factors influencing women's emotional responses to undergoing human papillomavirus testing in routine management in cervical screening: A qualitative study, BJOG: An International Journal of Obstetrics and Gynaecology, 121, (11), 2014, p1421 - 1429
Journal Article; Published; Peer Reviewed; Author Profile: OLEARYJJ; DOI; URL

Seiwert, T.Y., Wang, X., Heitmann, J., Villegas-Bergazzi, V., Sprott, K., Finn, S., O'Regan, E., Farrow, A.D., Weichselbaum, R.R., Lingen, M.W., Cohen, E.E.W., Stenson, K., Weaver, D.T., Vokes, E.E., DNA repair biomarkers XPF and phospho-MAPKAP kinase 2 correlate with clinical outcome in advanced head and neck cancer, PLoS ONE, 9, (7), 2014
Journal Article; Published; Peer Reviewed; Author Profile: FINNS

Fitzpatrick, J.M., Bellmunt, J., Fizazi, K., Heidenreich, A., Sternberg, C.N., Tombal, B., Alcaraz, A., Bahl, A., Bracarda, S., Di Lorenzo, G., Efstathiou, E., Finn, S.P., Fosså, S., Gillessen, S., Kellokumpu-Lehtinen, P.-L., Lecouvet, F.E., Oudard, S., De Reijke, T.M., Robson, C.N., De Santis, M., Seruga, B., De Wit, R., Optimal management of metastatic castration-resistant prostate cancer: Highlights from a European Expert Consensus Panel, European Journal of Cancer, 50, (9), 2014, p1617-1627
Journal Article; Published; Peer Reviewed; Author Profile: FINNS

Cree IA, Deans Z, Ligtenberg MJ, Normanno N, Edsjö A, Rouleau E, Solé F, Thunnissen E, Timens W, Schuuring E, Dequeker E, Murray S, Dietel M, Groenen P, Van Krieken JH, European Society of Pathology Task Force on Quality Assurance in Molecular Pathology, Royal College of Pathologists, Guidance for laboratories performing molecular pathology for cancer patients., 2014
Journal Article; Published; Peer Reviewed; Author Profile: FINNS

O'Brien CP, Finn SP, Application of statistical process control to qualitative molecular diagnostic assays., Frontiers in molecular biosciences, 1, 2014, p18
Journal Article; Published; Peer Reviewed; Author Profile: FINNS; DOI

Flavin R, Pettersson A, Hendrickson WK, Fiorentino M, Finn S, Kunz L, Judson GL, Lis R, Bailey D, Fiore C, Nuttall E, Martin NE, Stack E, Penney KL, Rider JR, Sinnott J, Sweeney C, Sesso HD, Fall K, Giovannucci E, Kantoff P, Stampfer M, Loda M, Mucci LA, SPINK1 protein expression and prostate cancer progression., Clinical cancer research : an official journal of the American Association for Cancer Research, 20, (18), 2014, p4904-11
Journal Article; Published; Peer Reviewed; Author Profiles: FLAVINR FINNS ; DOI

Ffrench B, Gasch C, O'Leary JJ, Gallagher MF, Developing ovarian cancer stem cell models: laying the pipeline from discovery to clinical intervention., Molecular cancer, 13, 2014, p262
Journal Article; Published; Peer Reviewed; Author Profile: OLEARYJJ; DOI

O'Connor, M. Murphy, J. Martin, C. O'Leary, J. Sharp, L., Motivators for women to attend cervical screening: The influential role of GPs, Family Practice, 31, (4), 2014, p475-482
Journal Article; Published; Peer Reviewed; Author Profile: OLEARYJJ; DOI; URL

Lawlor, D. Martin, P. Busschots, S. Thery, J. O'Leary, J.J. Hennessy, B.T. Stordal, B., PARP inhibitors as p-glyoprotein substrates, Journal of Pharmaceutical Sciences, 103, (6), 2014, p1913 - 1920
Journal Article; Published; Peer Reviewed; Author Profile: OLEARYJJ; DOI; URL

McRae, J. Martin, C. O'Leary, J. Sharp, L., "If you can't treat HPV, why test for it?" Women's attitudes to the changing face of cervical cancer prevention: A focus group study, BMC Women's Health, 14, (1), 2014, p64-
Journal Article; Published; Peer Reviewed; Author Profile: OLEARYJJ; DOI; URL

Sadlier C, Rowley D, Morley D, Surah S, O'Dea S, Delamere S, O'Leary J, Smyth P, Clarke S, Sheils O, Bergin C, Prevalence of human papillomavirus in men who have sex with men in the era of an effective vaccine; a call to act., HIV medicine, 15, (8), 2014, p499-504
Journal Article; Published; Peer Reviewed; Author Profiles: CLARKS10 OLEARYJJ OSHEILS ; DOI

Heavey S, Godwin P, Baird AM, Barr MP, Umezawa K, Cuffe S, Finn SP, O'Byrne KJ, Gately K, Strategic targeting of the PI3K-NF"B axis in cisplatin-resistant NSCLC., Cancer biology & therapy, 15, (10), 2014, p1367-77
Journal Article; Published; Peer Reviewed; Author Profiles: FINNS GATELYK ; DOI

Shikhrakab H, Elamin YY, O'Brien C, Gately K, Finn S, O'Byrne K, Osman N, Epidermal growth factor receptor (EGFR) mutation testing, from bench to practice: a single institute experience., Irish medical journal, 107, (7), 2014, p201-4
Journal Article; Published; Peer Reviewed; Author Profiles: FINNS GATELYK

Peters S, Weder W, Dafni U, Kerr KM, Bubendorf L, Meldgaard P, O'Byrne KJ, Wrona A, Vansteenkiste J, Felip E, Marchetti A, Savic S, Lu S, Smit E, Dingemans AM, Blackhall FH, Baas P, Camps C, Rosell R, Stahel RA, Lungscape: resected non-small-cell lung cancer outcome by clinical and pathological parameters., Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer, 9, (11), 2014, p1675-84
Journal Article; Published; Peer Reviewed; Author Profiles: FINNS GATELYK ; DOI

Keegan H, Pilkington L, McInerney J, Jeney C, Benczik M, Cleary S, von Bunau G, Turner M, D'Arcy T, O' Toole S, Pal-Szenthe B, Kaltenecker B, Mózes J, Kovács A, Solt A, Bolger N, O'Leary J, Martin C, Human papillomavirus detection and genotyping, by HC2, full-spectrum HPV and molecular beacon real-time HPV assay in an Irish colposcopy clinic., Journal of virological methods, 201, 2014, p93-100
Journal Article; Published; Peer Reviewed; Author Profiles: CMARTIN3 OLEARYJJ

O'Connor M, Costello L, Murphy J, Prendiville W, Martin CM, O'Leary JJ, Sharp L, 'I don't care whether it's HPV or ABC, I just want to know if I have cancer.' Factors influencing women's emotional responses to undergoing human papillomavirus testing in routine management in cervical screening: a qualitative study., BJOG : an international journal of obstetrics and gynaecology, 121, (11), 2014, p1421-9
Journal Article; Published; Peer Reviewed; Author Profile: CMARTIN3

Woods R, O'Regan EM, Kennedy S, Martin C, O'Leary JJ, Timon C, Role of human papillomavirus in oropharyngeal squamous cell carcinoma: A review., World journal of clinical cases, 2, (6), 2014, p172-93
Journal Article; Published; Peer Reviewed; Author Profile: CMARTIN3

Rashid N, Nawaz H, Poon KW, Bonnier F, Bakhiet S, Martin C, O'Leary JJ, Byrne HJ, Lyng FM, Raman microspectroscopy for the early detection of pre-malignant changes in cervical tissue., Experimental and molecular pathology, 97, (3), 2014, p554-64
Journal Article; Published; Peer Reviewed; Author Profiles: CMARTIN3 OLEARYJJ

Vencken SF, Sethupathy P, Blackshields G, Spillane C, Elbaruni S, Sheils O, Gallagher MF, O'Leary JJ, An integrated analysis of the SOX2 microRNA response program in human pluripotent and nullipotent stem cell lines., BMC genomics, 15, 2014, p711
Journal Article; Published; Peer Reviewed; Author Profiles: OLEARYJJ OSHEILS ; DOI

d'Adhemar CJ, Spillane CD, Gallagher MF, Bates M, Costello KM, Barry-O'Crowley J, Haley K, Kernan N, Murphy C, Smyth PC, O'Byrne K, Pennington S, Cooke AA, Ffrench B, Martin CM, O'Donnell D, Hennessy B, Stordal B, Finn S, McCann A, Gleeson N, D'Arcy T, Flood B, O'Neill LA, Sheils O, O'Toole S, O'Leary JJ, The MyD88+ phenotype is an adverse prognostic factor in epithelial ovarian cancer., PloS one, 9, (6), 2014, pe100816
Journal Article; Published; Peer Reviewed; Author Profiles: FINNS OSHEILS CMARTIN3 OLEARYJJ ; DOI

O'Grady S, Finn SP, Cuffe S, Richard DJ, O'Byrne KJ, Barr MP., The role of DNA repair pathways in cisplatin resistant lung cancer, Cancer Treatment Reviews, 40, (10), 2014, p1161 - 1170
Review Article; Published; Peer Reviewed; Author Profiles: BARRMA FINNS ; URL

Bonnier,F, Traynor, D, Kearney, P, Clarke,C, Peter Knief, P Martin, C, O'Leary,J, Byrne HJ and Lyng, F, Processing ThinPrep Cervical Cytological Samples for Raman Spectroscopic Analysis., Analytical Methods, 6, (19), 2014, p7831 - 7841
Journal Article; Published; Peer Reviewed; Author Profiles: CMARTIN3 OLEARYJJ

Noninvasive Biomarkers in Ovarian Cancer in, editor(s)Debmalya Barh, Angelo Carpi, Mukesh Verma, Mehmet Gunduz , Cancer Biomarkers: Minimal and Noninvasive Early Diagnosis and Prognosis , CRC press, 2014, [O'Toole, SA, Ancuta, E, Langhe, R, Cahill, DJ, Murphy, M, Martin, C, McEvoy, L, Spillane, C, Sheils, O, Petricoin, E, Liotta, L, O'Leary JJ]
Book Chapter; Published; Peer Reviewed; Author Profiles: SHOTOOLE CMARTIN3

Loy A, McInerney J, Pilkington L, Keegan H, Delamere S, Martin CM, Sheils O, O'Leary JJ, Mulcahy F., Human papillomavirus DNA and mRNA prevalence and association with cervical cytological abnormalities in the Irish HIV population., International Journal of Sexually Transmitted Diseases and AIDS, 2014
Journal Article; Approved; Peer Reviewed; Author Profiles: OSHEILS OLEARYJJ CMARTIN3

Busschots S, O'Toole S, O'Leary JJ, Stordal B. , Carboplatin and taxol resistance develops more rapidly in functional BRCA1 compared to dysfunctional BRCA1 ovarian cancer cells, Experimental Cell Research, 2014, p1 - 14
Journal Article; Published; Peer Reviewed; Author Profiles: SHOTOOLE OLEARYJJ ; DOI

Kelly LA, Seidlova-Wuttke D, Wuttke W, O'Leary JJ, Norris LA, Estrogen receptor alpha augments changes in hemostatic gene expression in HepG2 cells treated with estradiol and phytoestrogens. , Phytomedicine , 21, (2), 2014, p155 - 158
Journal Article; Published; Peer Reviewed; Author Profiles: KELLYL37 LNORRIS OLEARYJJ ; URL

d'Adhemar CJ, Spillane CD, Gallagher MF, Bates M, Costello KM, Barry-O'Crowley J, Haley K, Kernan N, Murphy C, Smyth PC, O'Byrne K, Pennington S, Cooke AA, Ffrench B, Martin CM, O'Donnell D, Hennessy B, Stordal B, Finn S, McCann A, Gleeson N, D'Arcy T, Flood B, O'Neill LA, Sheils O, O'Toole S, O'Leary JJ., The MyD88+ Phenotype Is an Adverse Prognostic Factor in Epithelial Ovarian Cancer., PLoS One. , 9, (6), 2014, pe100816-
Journal Article; Published; Peer Reviewed; Author Profiles: GLEESONN SHOTOOLE OLEARYJJ LAONEILL ; DOI

Lahiff C, Schilling C, Cathcart MC, Mulligan N, Doran P, Muldoon C, Murray D, Pidgeon GP, Reynolds JV, Macmathuna P, Prognostic significance of neuroepithelial transforming gene 1 in adenocarcinoma of the oesophagogastric junction., The British journal of surgery, 101, (2), 2014, p55-62
Journal Article; Published; Peer Reviewed; Author Profiles: PIDGEONG REYNOLJV ; DOI

Horan M, Weitz A, Mc Cormack O, Muldoon C, Ravi N, Reynolds JV, Severe dysphagia, candidiasis, and an oesophageal mass, but over 50 biopsies negative for malignancy., Dysphagia, 29, (1), 2014, p109-12
Journal Article; Published; Peer Reviewed; Author Profiles: REYNOLJV RAVIN ; DOI

Keegan Helen, Pilkington Loretto, McInerney Jamie, Jeney Csaba, Benczik Márta, Cleary Sinead, von Bunau Gunther, Turner Michael, D'Arcy Tom, O' Toole Sharon, Borbála Pal-Szenthe, Borbála Kaltenecker, Johanna Mózes, Anettc Kovács, Agnes Solt, Bolger Noel, O'Leary John, Martin Cara., Human papillomavirus detection and genotyping, by HC2, Full-Spectrum HPV and Molecular Beacon Real-Time HPV assay in an Irish colposcopy clinic, Journal of Virological Methods, 2014
Journal Article; Published; Peer Reviewed; Author Profiles: SHOTOOLE OLEARYJJ

Hayes BD, Finn SP, Kidney volume correlates with tumor diameter in renal cell carcinoma and is associated with histological poor prognostic features., International journal of surgical pathology, 22, (1), 2014, p39-46
Journal Article; Published; Peer Reviewed; Author Profile: FINNS

O'Brien CP, Langabeer SE, O'Byrne KJ, O'Leary JJ, Finn SP, Predictive values for molecular diagnostics: converting unknown unknowns to known unknowns., Molecular diagnosis & therapy, 18, (1), 2014, p1-4
Journal Article; Published; Peer Reviewed; Author Profiles: OLEARYJJ FINNS ; DOI

O'Brien CP, Taylor SE, O'Leary JJ, Finn SP, Molecular testing in oncology: Problems, pitfalls and progress., Lung cancer (Amsterdam, Netherlands), 2014
Journal Article; Published; Peer Reviewed; Author Profiles: FINNS OLEARYJJ ; DOI

Nur MM, Finn S, Reynolds JV, Identification of potential therapeutic molecular targets preferentially expressed by esophageal cancer cells., Expert review of anticancer therapy, 14, (3), 2014, p267-9
Journal Article; Published; Peer Reviewed; Author Profiles: FINNS REYNOLJV ; DOI

Doherty B, Lawlor D, Gillet JP, Gottesman M, O'Leary JJ, Stordal B, Collateral Sensitivity to Cisplatin in KB-8-5-11 Drug-resistant Cancer Cells., Anticancer research, 34, (1), 2014, p503-7
Journal Article; Published; Peer Reviewed; Author Profile: OLEARYJJ