Publications

Papers In press

CHRYSOULAKIS, N., LOPES, M., SAN JOSÉ, R., GRIMMOND, C.S.B., JONES, M.B., MAGLIULO, V., KLOSTERMANN, J.E., SYNNEFA, A., MITRAKA, Z., CASTRO, E.A., GONZÁLEZ, A.,VOGT, R., VESALA, T., SPANO, D., PIGEON, G., FREER-SMITH, P., STASZEWSKI, T., HODGES, N., MILLS, G. & CARTALIS C. (In Press). Sustainable urban metabolism as a link between bio-physical sciences and urban planning: The BRIDGE project. Landscape and Urban Planning.

GONZÁLEZ, A., DONNELLY, A., JONES, M., CHRYSOULAKIS, N. AND LOPES, M. (In Press). A decision-support system for sustainable urban metabolism in Europe. Environmental Impact Assessment Review.

MCNALLY, L., BROWN, S. P. & JACKSON, A. L. In press. Cooperation and the evolution of intelligence. Proceedings of the Royal Society of London B.

Nielsen A, Dauber J, Kunin WE, Lamborn E, Jauker B, Moora M, Potts SG, Reitan T, Roberts S, Sõber V, Settele J, Steffan-Dewenter I, Stout JC, Tscheulin T, Vaitis M, Vivarelli D, Biesmeijer JC and Petanidou T (In press) Pollinator community responses to the spatial population structure of wild plants: A pan-European approach. Basic and Applied Ecology.

O’Connor NE and Donohue I (in press). Environmental context determines the multi-trophic effects of consumer species loss. Global Change Biology.

O’Connor NE, Emmerson MC, Crowe TP and Donohue I. (in press). Distinguishing between direct and indirect effects of predators in complex ecosystems. Journal of Animal Ecology.

TANNER, C.J., & JACKSON, A.L. In press. The combination of social and personal contexts affects dominance hierarchy development in shore crabs (Carcinus maenas). Animal Behaviour.

TANNER, C.J., SALALI, G.D. & JACKSON, A.L. In press. The ghost of social environments past: dominance relationships include current interactions and experience carried over from previous groups. Biology Letters.

TRIAS-BLASI, A., PARNELL, J.A.N. & HODKINSON, T.R. 2012. Multi-gene region phylogenetic analysis of the grape family (Vitaceae). Systematic Botany, (in press).

2012

BONE, R. E., STRIJK, J. S., FRITSCH, P. W., BUERKI, S., STRASBERG, D., THEBAUD, C. & HODKINSON, T. R. 2012. Phylogenetic inference of Badula (Primulaceae), a rare and threatened genus endemic to the Mascarene Archipelago. Botanical Journal of the Linnean Society, 169, 284-296.

Charman DJ, Hohl V, Blundell A, Mitchell FJG and Oksanen P (2012). A 1000-year reconstruction of summer precipitation from Ireland: calibration of a peat-based palaeoclimate record. Quaternary International, 268: 87-97.

Coote L, French LJ, Moore K, Mitchell, FJG and Kelly DL (2012). Can forestry plantations support plant species and communities of semi-natural woodland? Forest Ecology and Management, 283: 86-95.

Coxon P, Mitchell FJG and Wyse Jackson P (2012). Dublin in the Grip of an Ice Age. Irish Quaternary Association (IQUA). Dublin.

DAVIES, A. R., DOYLE, R. & PAPE, J. 2012. Future visioning for sustainable household practices: spaces for sustainability learning? Area, 44, 54-60.

Diekmann K, Hodkinson TR and Barth S (2012). New chloroplast microsatellite markers suitable for assessing genetic diversity of Lolium perenne and other related grass species. Annals of Botany, 110(6), 1327-1339.

do Amaral, RR ; Santos, AAD ; Saravia, A ; Botas, G ; Cruz, RAS ; Fernandes, CP ; Rocha, L ; Boylan, F. Biological Activities of Arrabidaea chica (Bonpl.) B. Verl. Leaves. 2012. LATIN AMERICAN JOURNAL OF PHARMACY, 31, (3), 451-455.  

FINNAN, J., STYLES, D., FITZGERALD, J., CONNOLLY, J. & DONNELLY, A. 2012. Using a Strategic Environmental Assessment framework to quantify the environmental impact of bioenergy plans. Global Change Biology Bioenergy, 4, 311-329.

Grass Phylogeny Working Group II (2012), New grass phylogeny resolves deep evolutionary relationships and discovers C4 origins. New Phytologist, 193: 304–312.

GONZALEZ, A. (2012) GIS in Environmental Assessment: A Review of Current Issues and Future Needs. Journal of Environmental Assessment Policy and Management, 14 (1): XX.

HUGHES, T. A. & GRAY, N. F. 2012. Acute and chronic toxicity of acid mine drainage to the activated sludge process. Mine Water and the Environment, 31, 40-52.

JACKSON, M. C., DONOHUE, I., JACKSON, A. L., BRITTON, J. R., HARPER, D. M. & GREY, J. 2012. Population-level metrics of trophic structure based on stable isotopes and their application to invasion ecology. Plos One, 7.

Niko Radulović, Nevenka Đorđević, Marija Denić, Mariana Martins Gomes Pinheiro, Patricia Dias Fernandes, Fabio Boylan. 2012. A novel toxic alkaloid from poison hemlock (Conium maculatum L., Apiaceae): identification, synthesis and antinociceptive activity, Food and Chemical Toxicology, 50, (2), 274–279.

NIU, S. L., LUO, Y. Q., FEI, S. F., YUAN, W. P., SCHIMEL, D., LAW, B. E., AMMANN, C., ARAIN, M. A., ARNETH, A., AUBINET, M., BARR, A., BERINGER, J., BERNHOFER, C., BLACK, T. A., BUCHMANN, N., CESCATTI, A., CHEN, J. Q., DAVIS, K. J., DELLWIK, E., DESAI, A. R., ETZOLD, S., FRANCOIS, L., GIANELLE, D., GIELEN, B., GOLDSTEIN, A., GROENENDIJK, M., GU, L. H., HANAN, N., HELFTER, C., HIRANO, T., HOLLINGER, D. Y., JONES, M. B., KIELY, G., KOLB, T. E., KUTSCH, W. L., LAFLEUR, P., LAWRENCE, D. M., LI, L. H., LINDROTH, A., LITVAK, M., LOUSTAU, D., LUND, M., MAREK, M., MARTIN, T. A., MATTEUCCI, G., MIGLIAVACCA, M., MONTAGNANI, L., MOORS, E., MUNGER, J. W., NOORMETS, A., OECHEL, W., OLEJNIK, J., KYAW, T. P. U., PILEGAARD, K., RAMBAL, S., RASCHI, A., SCOTT, R. L., SEUFERT, G., SPANO, D., STOY, P., SUTTON, M. A., VARLAGIN, A., VESALA, T., WENG, E. S., WOHLFAHRT, G., YANG, B., ZHANG, Z. D. & ZHOU, X. H. 2012. Thermal optimality of net ecosystem exchange of carbon dioxide and underlying mechanisms. New Phytologist, 194, 775-783.

OLLERTON, J., PRICE, V., ARMBRUSTER, W., MEMMOTT, J., WATTS, S., WASER, N., TOTLAND, Ø., GOULSON, D., ALARCÓN, R., STOUT, J. & TARRANT, S. 2012. Overplaying the role of honey bees as pollinators: A comment on Aebi and Neumann (2011). Trends in Ecology and Evolution, 27, 141 - 142.

Ollerton J, Watts S, Connerty S, Lock J, Parker L, Wilson I, Schueller S, Nattero J, Cocucci AA, Izhaki I, Geerts S, Pauw A and Stout JC (2012). Pollination ecology of the invasive tree tobacco Nicotiana glauca: comparisons across native and non-native ranges. Journal of Pollination Ecology, 9: 85-95. Open access: http://www.pollinationecology.org/index.php?journal=jpe&page=article&op=view&path[]=189&path[]=56

O'NEILL, B. F., BOND, K., TYNER, A., SHEPPARD, R., BRYANT, T., CHAPMAN, J., BELL, J. & DONNELLY, A. 2012. Climatic change is advancing the phenology of moth species in Ireland. Entomologia Experimentalis et Applicata, 143, 74-88.

PARNELL, J. & CURTIS, T. 2012. Webb’s An Irish Flora. Cork University Press, Cork. 504 + LVI pp.

PARNELL, J. 2012. Aeginetia flava: a new and remarkable species of Aeginetia: Orobanchaceae from southeastern Thailand. Kew Bulletin, 67, 1-4.

Pinheiro, M.M.G.;  Boylan, F.; Fernandes, P.D. 2012. Antinociceptive effect of the Orbignya speciosa Mart. (Babassu) leaves: Evidence for the involvement of apigenin. Life Sciences, 91, 293-300.

POWER, E., KELLY, D. & JC, S. 2012. Organic farming and landscape structure: effects on insect-pollinated plant diversity in intensively managed grasslands. PLoS ONE, 7, e38073.

PRAJAKSOOD, A. & PARNELL, J. 2012. New taxa and new combinations of Eriocaulaceae from Thailand. Kew Bulletin, (in press).

SAUNDERS, M. J., KANSIIME, F. & JONES, M. B. 2012. Agricultural encroachment: implications for carbon sequestration in tropical African wetlands. Global Change Biology, 18, 1312-1321.

SINNOTT, D. & DYER, M. 2012. Air-tightness field data for dwellings in Ireland. Building and Environment, 51, 269-275.

SOH, W-K., & PARNELL, J. 2012. Three new species of Syzygium (Myrtaceae) from Indochina. Kew Bulletin, 66, 1-8.

TANNER, C. J. & JACKSON, A. L. 2012. Social structure emerges via the interaction between local ecology and individual behaviour. Journal of Animal Ecology, 81, 260-267.

Trias-Blasi A, Parnell JA and Hodkinson,TR (2012). Multi-gene Region Phylogenetic Analysis of the Grape Family (Vitaceae). Systematic Botany, 37(4), 941-950.

Wahab, Ikarastika Rahayu Abdul; Siu Hai Wong, Nikki; Boylan F. 2012 Choisyaternatine, a new alkaloid isolated from Choisya ternata. Planta Medica, 78, 1597-1600.

WILSON, J. & ROCHA, C. 2012. Regional scale assessment of Submarine Groundwater Discharge in Ireland combining medium resolution satellite imagery and geochemical tracing techniques. Remote Sensing of Environment, 119, 21-34.

2011

ABDALLA, M., KUMAR, S., JONES, M., BURKE, J. & WILLIAMS, M. 2011. Testing DNDC model for simulating soil respiration and assessing the effects of climate change on the CO2 gas flux from Irish agriculture. Global and Planetary Change, 78, 106-115.

AITKENHEAD, M. J., ALBANITO, F., JONES, M. B. & BLACK, H. I. J. 2011. Development and testing of a process-based model (MOSES) for simulating soil processes, functions and ecosystem services. Ecological Modelling, 222, 3795-3810.

ANIBAL, J., ESTEVES, E. & ROCHA, C. 2011. Seasonal variations in gross biochemical composition, percent edibility, and condition index of the clam Ruditapes decussatus cultivated in the Ria Formosa (South Portugal). Journal of Shellfish Research, 30, 17-23.

CAFFARRA, A. & DONNELLY, A. 2011. The ecological significance of phenology in four different tree species: effects of light and temperature on bud burst. International Journal of Biometeorology, 55, 711-721.

CAFFARRA, A., DONNELLY, A. & CHUINE, I. 2011. Modelling the timing of Betula pubescens budburst. II. Integrating complex effects of photoperiod into process-based models. Climate Research, 46, 159-170.

CAFFARRA, A., DONNELLY, A., CHUINE, I. & JONES, M. B. 2011. Modelling the timing of Betula pubescens budburst. I. Temperature and photoperiod: a conceptual model. Climate Research, 46, 147-157.

CARROLL, J., NEWMAN, C. & THORNE, F. 2011. A comparison of stochastic frontier approaches for estimating technical inefficiency and total factor productivity. Applied Economics, 43, 4007-4019.

COOPER, N., FRECKLETON, R. P. & JETZ, W. 2011. Phylogenetic conservatism of mammalian environmental niches. Proceedings of the Royal Society of London B: Biological Sciences, 278, 2384-2391.

CUNHA PEREIRA, H., ALLOTT, N., COXON, C., NAUGHTON, O., JOHNSTON, P. & GILL, L. 2011. Phytoplankton of turloughs (seasonal karstic Irish lakes). Journal of Plankton Research, 33, 385-403.

Cunningham, Francis; Menezes, Fabio S. 2011. Ethnopharmacology in Dublin: surveys on the medicinal plants use profile. REVISTA BRASILEIRA DE FARMACOGNOSIA-BRAZILIAN JOURNAL OF PHARMACOGNOSY 21, (5), 814-817.

DAVIES, A. R. & MULLIN, S. J. 2011. Greening the economy: interrogating sustainability innovations beyond the mainstream. Journal of Economic Geography, 11, 793-816

DELETRE, M., MCKEY, D. B. & HODKINSON, T. R. 2011. Marriage exchanges, seed exchanges, and the dynamics of manioc diversity. Proceedings of the National Academy of Sciences of the United States of America, 108, 18249-18254.

DERMODY, B. J., TANNER, C. J. & JACKSON, A. L. 2011. The Evolutionary Pathway to Obligate Scavenging in Gyps Vultures. Plos One, 6.

DIETZSCH, A. C., STANLEY, D. A. & STOUT, J. C. 2011. Relative abundance of an invasive alien plant affects native pollination processes Oecologia, 167, 469-479.

DONNELLY, A., CAFFARRA, A. & O'NEILL, B. F. 2011. A review of climate-driven mismatches between interdependent phenophases in terrestrial and aquatic ecosystems. International Journal of Biometeorology, 55, 805-817.

DONNELLY, A., O'NEILL, B. F., CAFFARRA, A. & SCHWARTZ, M. D. 2011. Special Issue, Phenology 2010 Conference, Dublin, Ireland. International Journal of Biometeorology, 55, 751-752.

DONNELLY, A., STYLES, D., FITZGERALD, J. & FINNAN, J. 2011. A proposed framework for determining the environmental impact of replacing agricultural grassland with Miscanthus in Ireland. Global Change Biology Bioenergy, 3, 247-263.

DUBBER, D. & GRAY, N. F. 2011. The effect of anoxia and anaerobia on ciliate community in biological nutrient removal systems using laboratory-scale sequencing batch reactors (SBRs). Water Research, 45, 2213-2226.

DUBBER, D. & GRAY, N. F. 2011. The influence of fundamental design parameters on ciliates community structure in Irish activated sludge systems. European Journal of Protistology, 47, 274-286.

DUFFY, K. & STOUT, J. 2011. Effects of conspecific and heterospecific floral density on the pollination of two related rewarding orchids. Plant Ecology, 212, 1397-1406.

DUFFY, K., FAY, M., SMITH, R. & STOUT, J. 2011. Population genetics and conservation of the small white orchid, Pseudorchis albida, in Ireland. Biology and Environment: Proceedings of the Royal Irish Academy, 111B, 1-9

ERDOGAN, E., POPOV, I., ROCHA, C. G., CUNIBERTI, G., ROCHE, S. & SEIFERT, G. 2011. Engineering carbon chains from mechanically stretched graphene-based materials. Physical Review B, 83.

GILL, L. W. 2011. The development of a Code of Practice for single house on-site wastewater treatment in Ireland. Water Science and Technology, 64, 677-683.

GILL, L. W., O'LUANAIGH, N. & JOHNSTON, P. M. 2011. On-site wastewater treatment using subsurface flow constructed wetlands in Ireland. Journal of Environmental Science and Health Part a-Toxic/Hazardous Substances & Environmental Engineering, 46, 723-728.

GODEFROID, S., RIVIERE, S., WALDREN, S., BORETOS, N., EASTWOOD, R. & VANDERBORGHT, T. 2011. To what extent are threatened European plant species conserved in seed banks? Biological Conservation, 144, 1494-1498.

GONZÁLEZ, A., DONNELLY, A., JONES, M., KLOSTERMANN, J., GROOT A. & BREIL, M. (2011). Community of practice approach to developing urban sustainability indicators. Journal of Environmental Assessment Policy and Management, 13(4) 591-617.

HODKINSON, T. R. 2011. Climate change, ecology and systematics, Cambridge Univ Press.

HODKINSON, T., JONES, M.B., WALDREN, S. & PARNELL, J.A.N. 2011. Climate Change, Ecology and Systematics. Systematics Association Special Volume Series 78. Cambridge University Press, Cambridge. 524 pages. (Editor).

IBANHEZ, J. S. P., LEOTE, C. & ROCHA, C. 2011. Porewater nitrate profiles in sandy sediments hosting submarine groundwater discharge described by an advection-dispersion-reaction model. Biogeochemistry, 103, 159-180.

JACKSON, A. L., INGER, R., PARNELL, A. C. & BEARHOP, S. 2011. Comparing isotopic niche widths among and within communities: SIBER - Stable Isotope Bayesian Ellipses in R. Journal of Animal Ecology, 80, 595-602.

JACKSON A.L.R. 2011. Renewable energy vs. biodiversity: Policy conflicts and the future of nature conservation. Global Environmental Change, 21, 1195

JONES K., JACKSON, A.L. & RUXTON, G.D. 2011. Prey jitters; protean behaviour in grouped prey. Behavioral Ecology, 22, 831-836.

MAYER, C., ADLER, L., ARMBRUSTER, S., DAFNI, A., EARDLEY, C., HUANG, S., KEVAN, P., OLLERTON, J., PACKER, L., SSYMANK, A., STOUT, J. & POTTS, S. 2011. Pollination ecology in the 21st century: key questions for future research. Journal of Pollination Ecology, 3, 8-23.

MITCHELL, F. J. G. 2011. Exploring vegetation in the fourth dimension. Trends in Ecology & Evolution, 26, 45-52.

MOLINOS, J. G. & DONOHUE, I. 2011. Temporal variability within disturbance events regulates their effects on natural communities. Oecologia, 166, 795-806.

MOORA, M., BERGER, S., DAVISON, J., ÖPIK, M., BOMMARCO, R., BRUELHEIDE, H., KÜHN, I., KUNIN, W., METSIS, M., RORTAIS, A., VANATOA, E., VANATOA, A., STOUT, J., TRUUSA, M.,

WESTPHAL, C., ZOBEL, M. & WALTHER, G.-R. 2011. Alien plants associate with widespread generalist arbuscular mycorrhizal fungal taxa: evidence from a continental-scale study using massively parallel 454-sequencing. Journal of Biogegraphy, 38, 1305-1317.

O'CONNOR, N. E., DONOHUE, I., CROWE, T. P. & EMMERSON, M. C. 2011. Importance of consumers on exposed and sheltered rocky shores. Marine Ecology-Progress Series, 443, 65-75.

O'REILLY, J., VINTRO, L. L., MITCHELL, P. I., DONOHUE, I., LEIRA, M., HOBBS, W. & IRVINE, K. 2011. Pb-210-dating of a lake sediment core from Lough Carra (Co. Mayo, western Ireland): use of paleolimnological data for chronology validation below the Pb-210 dating horizon. Journal of Environmental Radioactivity, 102, 495-499.

PARNELL, J. 2011. Lentibulariaceae. Pp. 16-45 in Flora of Thailand, 11(1). Eds. Santisuk, T., Larsen, K., Newman, M., Chayamarit, K., Balslev, H., Phengkhlai, C., Pedersen, H., Parnell, J., Middleton, D., Newman, M., Simpson, D.A., van Welzen, P.C., Esser, H.-J., Hul, S. & Kato M. The Forest Herbarium, National Park, Wildlife and Conservation Department.

PATEL, T., GILL, L. & FARAM, M. G. 2011. Grit removal from wastewater using secondary currents in open-channel flow around bends. Journal of Environmental Engineering-Asce, 137, 1026-1039.

PERRIN, P. M., MITCHELL, F. J. G. & KELLY, D. L. 2011. Long-term deer exclusion in yew-wood and oakwood habitats in southwest Ireland: Changes in ground flora and species diversity. Forest Ecology and Management, 262, 2328-2337.

POWER, E. F. & STOUT, J. C. 2011. Organic dairy farming: impacts on insect–flower interaction networks and pollination. Journal of Applied Ecology, 48, 561–569.

Radulovic, N; Blagojevic, PD; Rabbitt, K ; Menezes, FD. 2011. Essential oil of Nepeta x faassenii Bergmans ex Stearn (N. mussinii Spreng. x N. nepetella L.): A Comparison Study , Natural Product Communications, 6, (7), 1015 – 1022.

RADULOVIĆ, N.S., MILTOJEVIĆ, A.B., MCDERMOTT, M., WALDREN, S., PARNELL, J.A., GOMES PINHEIRO, M.M., DIAS FERNANDES, P., DE SOUSA MENEZES, F. 2011. Identification of a new antinociceptive alkaloid isopropyl N-methylanthranilate from the essential oil of Choisya ternata Kunth. Journal of Ethnopharmacology, 135, 610-619.

RICHARDS, E. L., THOMAS, R. J., MARPLES, N. M., SNELLGROVE, D. L. & CABLE, J. 2011. The expression of dietary conservatism in solitary and shoaling 3-spined sticklebacks Gasterosteus aculeatus. Behavioral Ecology, 22, 738.

ROCHA, C. G. & FERREIRA, M. S. 2011. A simple theoretical approach to designing nanotube-based sensors. Physica Status Solidi B-Basic Solid State Physics, 248, 686-693.

SANTISUK, T., LARSEN, K., NEWMAN, M., CHAYAMARIT, K., BALSLEV, H., PHENGKHLAI, C., PEDERSEN, H., PARNELL, J., MIDDLETON, D., NEWMAN, M., SIMPSON, D.A., VAN WELZEN, P.C.,

ESSER, H.-J., HUL, S. & KATO M. 2011. Flora of Thailand 11(1), 1 - 99 + VIIpp. Bangkok, The Forest Herbarium, Department of National Parks, Wildlife and Plant Conservation. (Editor).

SANTISUK, T., LARSEN, K., NEWMAN, M., CHAYAMARIT, K., BALSLEV, H., PHENGKHLAI, C., PEDERSEN, H., PARNELL, J., MIDDLETON, D., NEWMAN, M., SIMPSON, D.A., VAN WELZEN, P.C.,

ESSER, H.-J., HUL, S. & KATO M. 2011. Flora of Thailand 12(1), 1-302 + XXIVpp. Bangkok, The Forest Herbarium, Department of National Parks, Wildlife and Plant Conservation. (Editor).

SANTISUK, T., LARSEN, K., NEWMAN, M., CHAYAMARIT, K., BALSLEV, H., PHENGKHLAI, C., PEDERSEN, H., PARNELL, J., MIDDLETON, D., NEWMAN, M., SIMPSON, D.A., VAN WELZEN, P.C.,

HUL, S. & KATO M. 2011. Flora of Thailand, 10(4), 141-469-675pp + LXXVI plates. Bangkok, The Forest Herbarium, Departments of National Parks, Wildlife and Conservation, (Editor).

SIDDALL, E. C. & MARPLES, N. M. 2011. The effect of pyrazine odor on avoidance learning and memory in wild robins Erithacus rubecula. Current Zoology, 57.

SIDDALL, E., BAIBARAC, C., BYRNE, A., BYRNE, N., DEASY, A., FLOOD, N., GOULDING, C., O'DRISCOLL, S., RABBITT, N., SWEENEY, A., WANG, Y. & DYER, M. 2011. Personas as a user-centred design tool for the built environment. Proceedings of the Institution of Civil Engineers-Engineering Sustainability, 164, 59-69.

SOH, W-K. & PARNELL, J. 2011. Comparative leaf anatomy and phylogeny of Syzygium Gaertn. Plant Systematics and Evolution, 297, 1-32. (DOI 10.1007/s00606-011-0495-2)

Souza, P.A.V.R., Jr, A.P., Alves, L.M., Souza, V.P., Cabral, L.M., Fernandes, P.D., Takiya, C.M., Menezes, F.S., Nasciutti, L.E. 2011. Effects of a nanocomposite containing Orbignya speciosa lipophilic extract on Benign Prostatic Hyperplasia, Journal of Ethnopharmacology, 135, (1), 135-146

STOUT, J. C. 2011. Plant invasions: their threats in an Irish context. Biology and Environment: Proceedings of the Royal Irish Academy, 3, 1-7.

TANNER, C. J. & JACKSON, A. L. 2011. The combination of social and personal contexts affects dominance hierarchy development in shore crabs, Carcinus maenas. Animal Behaviour, 82, 1185-1192.

TANNER, C. J., SALALI, G. D. & JACKSON, A. L. 2011. The ghost of social environments past: dominance relationships include current interactions and experience carried over from previous groups. Biology Letters, 7, 818-821.

TANNER, C. J., SALALT, G. D. & JACKSON, A. L. 2011. Feeding and non-feeding aggression can be induced in invasive shore crabs by altering food distribution. Behavioral Ecology and Sociobiology, 65, 249-256.

TEERAWATANANON, A., SUNGKAEW, S. & HODKINSON, T. R. 2011. Arundinella kerrii and Dimeria kerrii, Two New Endemic Species from Thailand (Poaceae, Panicoideae). Novon, 21, 149-153.

THOMASSET, M., FERNANDEZ-MANJARRES, J. F., DOUGLAS, G. C., FRASCARIA-LACOSTE, N., RAQUIN, C. & HODKINSON, T. R. 2011.Molecular and morphological characterization of reciprocal F1 hybrid ash (Fraxinus excelsior x Fraxinus angustifolia, Oleaceae) and parental species reveals symmetric character inheritance. International Journal of Plant Sciences, 172, 423-433.

TRIAS-BLASI, A., PARNELL, J.A.N. & CHAYAMARIT, K. 2011. Cissus amplexicaulis (Vitaceae), a new endemic species from Thailand. Kew Bulletin, 65, 1 – 4.

TRIAS-BLASI, A., PARNELL, J.A.N., CHAYAMARIT, K., TEERAWATANAN, A., 2011. Cayratia emarginata (Vitaceae), a new species from Thailand and Vietnam. Blumea, 56, 16-17.

UGOLETTI, P., STOUT, J. & JONES, M. 2011. Ecophysiological traits of invasive and non-invasive introduced Impatiens species. Biology and Environment: Proceedings of the Royal Irish Academy, 111B, 143 - 156.

VAN WELZEN, P.F., MADERN, A., RAES, N., PARNELL, J.A.N., SIMPSON, D.A., BYRNE, C., CURTIS, T., MACKLIN, J., TRIAS-BLASI, A., PRAJAKSOOD, A., BYGRAVE, P., DRANSFIELD, S., KIRKUP,

D.W., MOAT, J., WILKIN, P., COUCH, C., BOYCE. P.C., CHAYAMARIT, K., CHANTARANOTHAI, P., ESSER, H-J., JEBB, M.H.P., LARSEN, K., LARSEN, S.S., NIELSEN, I., MEADE, C., MIDDLETON, D.J.,

PENDRY, C.A., MUSAYA, A.M., PATTHARAHIRANTRICIN, N., POOMA, R., SUDDEE, S., STAPLES, G., SUNGKAEW, S. & TEERAWATANANON, A. 2011. The current and future status of Floristic Provinces in Thailand. Pp.219-247 in Land use, climate change and Biodiversity Modeling. Perspectives and applications. Eds. Y. Trisurat, R.P. Shrestha, & R. Alkemade. Information Science Reference, Hershey. 489pp.

VAN WELZEN, P.F., PARNELL, J.A.N. & SLIK, J.W.F. 2011. Wallace's Line and plant distributions, two or three phytogeographical areas and where to group Java? Biological Journal of the Linnean Society, 103, 531 – 545.

VIANA, M., GRAHAM, N., WILSON, J. G. & JACKSON, A. L. 2011. Fishery discards in the Irish Sea exhibit temporal oscillations and trends reflecting underlying processes at an annual scale. Ices Journal of Marine Science, 68, 221-227.

Wahab, Ikarastika Rahayu Abdul; Blagojevic, Polina D.; Radulovic, Niko S; Boylan F. 2011. Volatiles of Curcuma mangga Val. & Zijp (Zingiberaceae) from Malaysia. CHEMISTRY & BIODIVERSITY, 8, (11), 2005-2014.

WHILDE, J. & MARPLES, N. 2011. The behavior of a zoo‐housed infant orangutan after the death of its mother. Zoo Biology, 30, 205-211.

WHILDE, J. & MARPLES, N. 2011. Effect of a birth on the behavior of a family group of Asian elephants (Elephas maximus) at Dublin Zoo. Zoo Biology. doi: 10.1002/zoo.20408

2010

ABDALLA, M., JONES, M. & WILLIAMS, M. 2010. Simulation of N2O fluxes from Irish arable soils: effect of climate change and management. Biology and Fertility of Soils, 46, 247-260.

ABDALLA, M., JONES, M., AMBUS, P. & WILLIAMS, M. 2010. Emissions of nitrous oxide from Irish arable soils: effects of tillage and reduced N input. Nutrient Cycling in Agroecosystems, 86, 53-65.

ABDALLA, M., JONES, M., YELURIPATI, J., SMITH, P., BURKE, J. & WILLIAMS, M. 2010c. Testing DayCent and DNDC model simulations of N2O fluxes and assessing the impacts of climate change on the gas flux and biomass production from a humid pasture. Atmospheric Environment, 44, 2961-2970.

BIELBY, J., CARDILLO, M., COOPER, N. & PURVIS, A. 2010. Modelling extinction risk in multispecies data sets: phylogenetically independent contrasts versus decision trees. Biodiversity and Conservation, 19, 113-127.

BOUCHENAK-KHELLADI, Y., VERBOOM, G. A., SAVOLAINEN, V. & HODKINSON, T. R. 2010. Biogeography of the grasses (Poaceae): a phylogenetic approach to reveal evolutionary history in geographical space and geological time. Botanical Journal of the Linnean Society, 162, 543-557.

CLEARY, G. P., CORNER, L. A. L., O'KEEFFE, J. & MARPLES, N. M. 2010. Diet of the European badger (Meles meles) in the Republic of Ireland: A comparison of results from an analysis of stomach contents and rectal faeces. Mammalian Biology-Zeitschrift fur Saugetierkunde.

COOPER, N. & PURVIS, A. 2010. Body size evolution in mammals: complexity in tempo and mode. The American Naturalist, 175, 727-738.

COOPER, N., JETZ, W. & FRECKLETON, R. P. 2010. Phylogenetic comparative approaches for studying niche conservatism. Journal of Evolutionary Biology, 23, 2529–2539.

DAUBER, J., BIESMEIJER, J., GABRIEL, D., KUNIN, W., LAMBORN, E., MEYER, B., NIELSEN, A., POTTS, S., SÕBER, V., STEFFAN-DEWENTER, I., SETTELE, J., STOUT, J., TEDER, T., TSCHEULIN, T.,

VIVARELLI, D. & PETANIDOU, T. 2010. Effects of plant population structure on flower visitation and seed set of wild plants at two spatial scales: a pan-European approach. Journal of Ecology, 98, 188-196.

DAUBER, J., JONES, M. B. & STOUT, J. C. 2010. The impact of biomass crop cultivation on temperate biodiversity. Global Change Biology Bioenergy, 2, 289-309.

DAVIES, A. 2010. A living countryside: the politics of sustainable development in rural Ireland. Journal of Environmental Policy & Planning, 12, 107-110.

DAVIS, P. A., BROWN, J. C., SAUNDERS, M., LANIGAN, G., WRIGHT, E., FORTUNE, T., BURKE, J., CONNOLLY, J., JONES, M. B. & OSBORNE, B. 2010. Assessing the effects of agricultural management practices on carbon fluxes: Spatial variation and the need for replicated estimates of Net Ecosystem Exchange. Agricultural and Forest Meteorology, 150, 564-574.

DE CESARE, M., HODKINSON, T. R. & BARTH, S. 2010. Chloroplast DNA markers (cpSSRs, SNPs) for Miscanthus, Saccharum and related grasses (Panicoideae, Poaceae). Molecular Breeding, 26, 539-544.

DONOHUE, I., LEIRA, M., HOBBS, W., LEÓN-VINTRÓ, L., O'REILLY, J. & IRVINE, K. 2010. Rapid ecosystem recovery from diffuse pollution after the Great Irish Famine. Ecological Applications, 20, 1733-1743.

DUBBER, D. & GRAY, N. F. 2010. Replacement of chemical oxygen demand (COD) with total organic carbon (TOC) for monitoring wastewater treatment performance to minimize disposal of toxic analytical waste. Journal of Environmental Science and Health Part a-Toxic/Hazardous Substances & Environmental Engineering, 45, 1595-1600.

Esteves, PF; Kuster, RM; Barbi, ND; Menezes, FD. 2010. Chemical Composition and Cytotoxic Activity of Lepechinia speciosa (St. Hill) Epling , Latin American Journal of Pharmacy, 29, (1), 38 – 44.

FITZGERALD, H., GALLEY, C., BYRNE, C. & PARNELL, J. 2010. Flora of the Burren and South-east Connemara. CD produced by ETI Bioinformatics – WWW.etiis.org.uk

Frankish, N; Menezes, FD; Mills, C; Sheridan, H. 2010. Enhancement of Insulin Release from the beta-Cell Line INS-1 by an Ethanolic Extract of Bauhinia variegata and Its Major Constituent Roseoside, Panta Medica, 76, (10), 995 – 997.

GRAY, N. F. & DELANEY, E. 2010. Measuring community response of bentic macroinvertebrates in an erosional river impacted by acid mine drainage by use of a simple model. Ecological Indicators, 10, 668-675.

HAMMEN, V., BIESMEIJER, J., KUNIN, W., BOMMARCO, R., BUDRYS, E., CHRISTENSEN, T., FRONZEK, S., GRABAUM, R., KLOTZ, S., KROEL-DULAY, G., KÜHN, I., LASKOWSKI, R., MIRTL, M.,

PETANIDOU, T., POTTS, S., RORTAIS, A., SCHULZE, C., STEFFAN-DEWENTER, I., STOUT, J., VAISSIERE, B., VILA, M., VIGHI, M., WOLF, T., WOYCIECHOWSKI, M., ZAVALA, G., ZOBEL, M. &

SETTELE, J. 2010. Establishment of a cross-European field site network in the ALARM Project for assessing large-scale changes in biodiversity. Environmental Monitoring and Assessment, 164, 337-348.

HODKINSON, T. R., CHONGHAILE, G. N., SUNGKAEW, S., CHASE, M. W., SALAMIN, N. & STAPLETON, C. M. A. 2010. Phylogenetic analyses of plastid and nuclear DNA sequences indicate a rapid late Miocene radiation of the temperate bamboo tribe Arundinarieae (Poaceae, Bambusoideae). Plant Ecology & Diversity, 3, 109-120.

INGER, R., MCDONALD, R. A., ROGOWSKI, D., JACKSON, A. L., PARNELL, A., PRESTON, S. J., HARROD, C., GOODWIN, C., GRIFFITHS, D., DICK, J. T. A., ELWOOD, R. W., NEWTON, J. & BEARHOP, S. 2010. Do non-native invasive fish support elevated lamprey populations? Journal of Applied Ecology, 47, 121-129.

KAVANAGH, R. & DAVIES, A.R. 2010. Increasing public knowledge and awareness of biodiversity: A reference manual, http://www.biochange.ie/Reference%20manual.pdf

KAZUKAUSKAS, A., NEWMAN, C. & THORNE, F. 2010. Analysing the Effect of Decoupling on Agricultural Production: Evidence from Irish Dairy Farms using the Olley and Pakes Approach. German Journal of Agricultural Economics, 59, 144-157.

KELLY, D., MARPLES, N. & SINGER, H. 2010. A population of Lemon-bellied White-eye Zosterops chloris from the south-eastern peninsula of Sulawesi. Forktail, 26, 138 - 139

LEE, T. J., MARPLES, N. M. & SPEED, M. P. 2010. Can dietary conservatism explain the primary evolution of aposematism? Animal Behaviour, 79, 63-74.

MARPLES, N. M. & MAPPES, J. 2010. Can the dietary conservatism of predators compensate for positive frequency dependent selection against rare, conspicuous prey? Evolutionary Ecology, 1-13.

MCGRATH, S., HODKINSON, T. R., CHARLES, T. M., ZEN, D. G. & BARTH, S. 2010. Variation in inflorescence characters and inflorescence development in ecotypes and cultivars of Lolium perenne L. Grass and Forage Science, 65, 398-409.

MICHENEAU, C., DUFFY, K., SMITH, R., STOUT, J., CIVEYREL, L., COWAN, R., COZZOLINO, S. & FAY, M. 2010. Plastid microsatellites for the study of genetic variability in the widespread Cephalanthera longifolia, C. damasonium and C. rubra (Neottieae, Orchidaceae), and cross amplification in other Cephalanthera species. Botanical Journal of the Linnean Society 163, 181-193.

MITCHELL, F. J. G. 2010. William Arthur Watts (1930-2010). Biology and Environment-Proceedings of the Royal Irish Academy, 110B, III-IV.

MOLINOS, J. G. & DONOHUE, I. 2010. Interactions among temporal patterns determine the effects of multiple stressors. Ecological Applications, 20, 1794-1800.

O'LUANAIGH, N. D., GOODHUE, R. & GILL, L. W. 2010. Nutrient removal from on-site domestic wastewater in horizontal subsurface flow reed beds in Ireland. Ecological Engineering, 36, 1266-1276.

PARNELL, A. C., INGER, R., BEARHOP, S. & JACKSON, A. L. 2010. Source partitioning using stable isotopes: coping with too much variation. Plos One, 5.

PARNELL, J.A.N., WOMERSLEY, H.B.S., SINKORA, D., VAUGHAN, A. & HUISMAN, J.M. 2010. W.H. Harvey’s Australian Travelling Sets of Algae in the Herbarium of Trinity College Dublin (TCD) and the National Herbarium of Victoria (MEL). Biology and Environment (Proceedings of the Royal Irish Academy), 110B, 119-161.

Paula Macedo Lessa dos Santos; Alberto Sadda Japp; Lívia Gralato Lima; Jan Schripsema; Fábio de Sousa Menezes; Ricardo Machado Kuster. 2010. Antioxidant activity from the leaf extracts of Jacaranda puberula Cham., Bignoniaceae, a Brazilian medicinal plant used for blood depuration, Revista Brasileira de Farmacognosia-Brazilian Journal of Pharmacognosy , 20, (2), 147 – 153.

PEREIRA, H. C., ALLOTT, N. & COXON, C. 2010. Are seasonal lakes as productive as permanent lakes? A case study from Ireland. Canadian Journal of Fisheries and Aquatic Sciences, 67, 1291-1302.

PEREIRA, L. F. C., ROCHA, C. G., LATGE, A. & FERREIRA, M. S. 2010. A computationally efficient method for calculating the maximum conductance of disordered networks: Application to one-dimensional conductors. Journal of Applied Physics, 108.

Pinheiro, MMG; Bessa, SO; Fingolo, CE; Kuster, RM; Matheus, ME; Menezes, FS; Fernandes, PD. 2010. Antinociceptive activity of fractions from Couroupita guianensis Aubl. leaves , Journal of Ethnopharmacology, 127, (2), 407 – 413.

Rocha, FD; Yano, M; da Cunha, MR; Gabriel, FT; Cordeiro, RSB; Menezes, FS ; Kaplan, MAC. 2010. Brazilian Bromeliaceae species: isolation of arylpropanoid acid derivatives and antiradical potential , REVISTA BRASILEIRA DE FARMACOGNOSIA-BRAZILIAN JOURNAL OF PHARMACOGNOSY , 20, (2), 240 – 245.

SANTISUK, T. WILKIN, P., POOMA, R., WONGPRASAT, T., CHAYAMARIT, K., SIMPSON, D., PARNELL, J.A.N., MIDDLETON, D., WILKIN, P., VAN WELZEN, P., ESSER, H.-J., UTTERIDGE, T. &

SAUNDERS, R. 2010. Thai Forest Bulletin, 38, 1-188. (Editor).

SANTISUK, T., LARSEN, K., NEWMAN, M., CHAYAMARIT, K., BALSLEV, H., PHENGKHLAI, C., PEDERSEN, H., PARNELL, J., MIDDLETON, D., NEWMAN, M., SIMPSON, D.A., VAN WELZEN, P.C.,

HUL, S. & KATO M. 2010. Flora of Thailand, 10 (2), 141-198pp + XXXII plates. Bangkok, The Forest Herbarium, Departments of National Parks, Wildlife and Conservation, (Editor).

SANTISUK, T., LARSEN, K., NEWMAN, M., CHAYAMARIT, K., BALSLEV, H., PHENGKHLAI, C., PEDERSEN, H., PARNELL, J., MIDDLETON, D., NEWMAN, M., SIMPSON, D.A., VAN WELZEN, P.C.,

HUL, S. & KATO M. 2010. Flora of Thailand, 10 (3), 265-369pp + LVI plates. Bangkok, The Forest Herbarium, Departments of National Parks, Wildlife and Conservation, (Editor).

SCHWEIGER, O., BIESMEIJER, J. C., BOMMARCO, R., HICKLER, T., HULME, P. E., KLOTZ, S., KÜHN, I., MOORA, M., NIELSEN, A., OHLEMÜLLER, R., PETANIDOU, T., POTTS, S. G., PYŠEK, P., STOUT,

J. C., SYKES, M. T., TSCHEULIN, T., VILÀ, M., WALTHER, G. R., WESTPHAL, C., WINTER, M., ZOBEL, M. & SETTELE, J. 2010. Multiple stressors on biotic interactions: how climate change and alien species interact to affect pollination. Biological Reviews, 85, 777-795.

SIMAO, M. F., LEITE, R. B., ROCHA, C. & CANCELA, M. L. 2010. Changes in bioturbation of iron biogeochemistry and in molecular response of the clam Ruditapes decussates upon Perkinsus olseni infection. Archives of Environmental Contamination and Toxicology, 59, 433-443.

SMITH, R. J. & WALDREN, S. 2010. Patterns of genetic variation in Colchicum autumnale L. and its conservation status in Ireland: a broader perspective on local plant conservation. Conservation Genetics, 11, 1351-1361.

SOH, W.K. & PARNELL, J. 2010. The phylogeny and evolution of morphological characters in Syzygium (Myrtaceae): towards a taxonomic revision in Malesia. Abstract of 8th International Flora Malesiana Symposium – The past, present and future of Flora Malesiana. Pp. 73. Singapore Botanic Gardens.

SUKSATHAN, P. & PARNELL, J.A.N. 2010. Three new species and two new records of Utricularia L. (Lentibulariaceae) from Northern Thailand. Thai Forest Bulletin, 38, 23-32.

THOMAS, R. J., KING, T. A., FORSHAW, H. E., MARPLES, N. M., SPEED, M. P. & CABLE, J. 2010. The response of fish to novel prey: evidence that dietary conservatism is not restricted to birds. Behavioral Ecology, 21, 669-675.

TRIAS-BLASI, A., PARNELL, J.A.N. & CHAYAMARIT, K. 2010. Cissus amplexicaulis (Vitaceae), a new endemic species from Thailand. Kew Bulletin, 65, 1-4.

ULLOA, C. U., NICKRENT, D. L., WHITEFOORD, C. & KELLY, D. L. 2010. Hondurodendron, a New Monotypic Genus of Aptandraceae from Honduras 1. Annals of the Missouri Botanical Garden, 97, 457-467

UR-RASHID, M., PARNELL, J. & PATON, A. 2010. Revision of the genus Gmelina (Lamiaceae) in Southeast Asia. Abstract of 8th International Flora Malesiana Symposium – The past, present and future of Flora Malesiana. Pp. 71. Singapore Botanic Gardens.

VAN GROENIGEN, K. J., BLOEM, J., BAATH, E., BOECKX, P., ROUSK, J., BODE, S., FORRISTAL, D. & JONES, M. B. 2010. Abundance, production and stabilization of microbial biomass under conventional and reduced tillage. Soil Biology & Biochemistry, 42, 48-55.

2009

ABDALLA, M., JONES, M., SMITH, P. & WILLIAMS, M. 2009a. Nitrous oxide fluxes and denitrification sensitivity to temperature in Irish pasture soils. Soil Use and Management, 25, 376-388.

ABDALLA, M., WATTENBACH, M., SMITH, P., AMBUS, P., JONES, M. & WILLIAMS, M. 2009b. Application of the DNDC model to predict emissions of N2O from Irish agriculture. Geoderma, 151, 327-337.

ALBANITO, F., SAUNDERS, M. & JONES, M. B. 2009. Automated diffusion chambers to monitor diurnal and seasonal dynamics of the soil CO2 concentration profile. European Journal of Soil Science, 60, 507-514.

BOUCHENAK-KHELLADI, Y., VERBOOM, G. A., HODKINSON, T. R., SALAMIN, N., FRANCOIS, O., NI CHONGHAILE, G. & SAVOLAINEN, V. 2009. The origins and diversification of C-4 grasses and savanna-adapted ungulates. Global Change Biology, 15, 2397-2417.

BYRNE, C. & PARNELL, J. 2009. Flora of Thailand: Phylogenetic revision of the Clusiaceae and Hypericaceae. CD produced by ETI Bioinformatics – WWW.etiis.org.uk

CARROLL, E., SPARKS, T., DONNELLY, A. & COONEY, T. 2009. Irish phenological observations from the early 20th century reveal a strong response to temperature. Biology and Environment-Proceedings of the Royal Irish Academy, 109B, 115-126.

CLEARY, G. P., CORNER, L. A. L., O'KEEFFE, J. & MARPLES, N. M. 2009. The diet of the badger Meles meles in the Republic of Ireland. Mammalian Biology-Zeitschrift fur Saugetierkunde, 74, 438-447.

DAVIES, A. R. 2009. Clean and green? A governance analysis of waste management in New Zealand. Journal of Environmental Planning and Management, 52, 157-176.

DAVIES, A. R. 2009. Does Sustainability Count? Environmental policy, sustainable development and the governance of grassroots sustainability enterprise in Ireland. Sustainable Development, 17, 174-182.

DIEKMANN, K., HODKINSON, T. R., WOLFE, K. H., VAN DEN BEKEROM, R., DIX, P. J. & BARTH, S. 2009. Complete chloroplast genome sequence of a major allogamous forage species, perennial ryegrass (Lolium perenne L.). DNA Research, 16, 165-176.

DONDINI, M., HASTINGS, A., SAIZ, G., JONES, M. B. & SMITH, P. 2009. The potential of Miscanthus to sequester carbon in soils: comparing field measurements in Carlow, Ireland to model predictions. Global Change Biology Bioenergy, 1, 413-425.

DONDINI, M., VAN GROENIGEN, K. J., DEL GALDO, I. & JONES, M. B. 2009. Carbon sequestration under Miscanthus: a study of C-13 distribution in soil aggregates. Global Change Biology Bioenergy, 1, 321-330.

DONNELLY, A., COONEY, T., JENNINGS, E., BUSCARDO, E. & JONES, M. 2009. Response of birds to climatic variability; evidence from the western fringe of Europe. International Journal of Biometeorology, 53, 211-220.

DONOHUE, I. & MOLINOS, J. G. 2009. Impacts of increased sediment loads on the ecology of lakes. Biological Reviews, 84, 517-531.

DONOHUE, I., DONOHUE, L. A., AININ, B. N. & IRVINE, K. 2009. Assessment of eutrophication pressure on lakes using littoral invertebrates. Hydrobiologia, 633, 105-122.

DONOHUE, I., JACKSON, A. L., PUSCH, M. T. & IRVINE, K. 2009. Nutrient enrichment homogenizes lake benthic assemblages at local and regional scales. Ecology, 90, 3470-3477.

DUBBER, D. & GRAY, N. F. 2009. Enumeration of protozoan ciliates in activated sludge: Determination of replicate number using probability. Water Research, 43, 3443-3452.

DUFFY, K., KINGSTON, N., SAYERS, B., ROBERTS, D. & STOUT, J. 2009. Inferring national and regional declines of rare orchid species using probabilistic models. Conservation Biology, 23, 184-195.

DUFFY, K., SCOPECE, G., COZZOLINO, S., FAY, M., SMITH, R. & STOUT, J. 2009. The ecology and genetic diversity of the dense-flowered orchid (Neotinea maculata) at the centre and edge of its range. Annals of Botany, 104, 507-516.

DYER, M., UTILI, S. & ZIELINSKI, M. 2009. Field survey of desiccation fissuring of flood embankments. Proceedings of the Institution of Civil Engineers-Water Management, 162, 221-232.

FINNEGAN, L., POOLE, A., LAWTON, C. & ROCHFORD, J. 2009. Morphological diversity of the red squirrel, Sciurus vulgaris, in Ireland. European Journal of Wildlife Research, 55, 145-151.

GILL, L. W., O'LUANAIGH, N., JOHNSTON, P. M., MISSTEAR, B. D. R. & O'SUILLEABHAIN, C. 2009b. Nutrient loading on subsoils from on-site wastewater effluent, comparing septic tank and secondary treatment systems. Water Research, 43, 2739-2749.

GILL, L. W., O'SULLEABHAIN, C., MISSTEAR, B. D. R. & JOHNSTON, P. M. 2009c. Comparison of Stratified Sand Filters and Percolation Trenches for On-Site Wastewater Treatment. Journal of Environmental Engineering-Asce, 135, 8-16.

GILL, L., DORAN, C., MISSTEAR, D. & SHEAHAN, B. 2009a. The use of recycled glass as a filter media for on-site wastewater treatment. Desalination and Water Treatment, 4, 198-205.

JACKSON, A. L., INGER, R., BEARHOP, S. & PARNELL, A. 2009. Erroneous behaviour of MixSIR, a recently published Bayesian isotope mixing model: a discussion of Moore & Semmens (2008). Ecology Letters, 12, E1-E5.

JENNINGS, E., ALLOTT, N., PIERSON, D. C., SCHNEIDERMAN, E. M., LENIHAN, D., SAMUELSSON, P. & TAYLOR, D. 2009. Impacts of climate change on phosphorus loading from a grassland catchment: Implications for future management. Water Research, 43, 4316-4326.

KENNY, T. & GRAY, N. F. 2009. A preliminary survey of household and personal carbon dioxide emissions in Ireland. Environment International, 35, 259-272.

KIRWAN, D. F., DE MENEZES, V. M., ROCHA, C. G., COSTA, A. T., MUNIZ, R. B., FAGAN, S. B. & FERREIRA, M. S. 2009. Enhanced spin-valve effect in magnetically doped carbon nanotubes. Carbon, 47, 2533-2537.

MCGINNITY, P., JENNINGS, E., DEEYTO, E., ALLOTT, N., SAMUELSSON, P., ROGAN, G., WHELAN, K. & CROSS, T. 2009. Impact of naturally spawning captive-bred Atlantic salmon on wild populations: depressed recruitment and increased risk of climate-mediated extinction. Proceedings of the Royal Society B-Biological Sciences, 276, 3601-3610.

MCNABOLA, A. & GILL, L. W. 2009. The control of environmental tobacco smoke: a policy review. International Journal of Environmental Research and Public Health, 6, 741-758.

MCNABOLA, A., BRODERICK, B. M. & GILL, L. W. 2009a. The impacts of inter-vehicle spacing on in-vehicle air pollution concentrations in idling urban traffic conditions. Transportation Research Part D-Transport and Environment, 14, 567-575.

MCNABOLA, A., BRODERICK, B. M. & GILL, L. W. 2009b. A numerical investigation of the impact of low boundary walls on pedestrian exposure to air pollutants in urban street canyons. Science of the Total Environment, 407, 760-769.

MCNABOLA, A., BRODERICK, B. M. & GILL, L. W. 2009c. A principal components analysis of the factors effecting personal exposure to air pollution in urban commuters in Dublin, Ireland. Journal of Environmental Science and Health Part a-Toxic/Hazardous Substances & Environmental Engineering, 44, 1219-1226.

MILBAU, A., STOUT, J. C., GRAAE, B. J. & NIJS, I. 2009. A hierarchical framework for integrating invasibility experiments incorporating different factors and spatial scales. Biological Invasions, 11, 941-950.

MOLINOS, J. G. & DONOHUE, I. 2009. Differential contribution of concentration and exposure time to sediment dose effects on stream biota. Journal of the North American Benthological Society, 28, 110-121.

NEILL, L. O., VELDHUIZEN, T., DE JONGH, A. & ROCHFORD, J. 2009. Ranging behaviour and socio-biology of Eurasian otters (Lutra lutra) on lowland mesotrophic river systems. European Journal of Wildlife Research, 55, 363-370.

NIENHUIS, C. M. & STOUT, J. C. 2009. Effectiveness of native bumblebees as pollinators of the alien invasive plant Impatiens glandulifera (Balsiminaceae) in Ireland. Journal of Pollination Ecology, 1, 1-11.

NIENHUIS, C. M., DIETZSCH, A. C. & STOUT, J. C. 2009. The impacts of an invasive alien plant and its removal on native bees. Apidologie, 40 450-463.
O'LUANAIGH, N., JOHNSTON, P., MISSTEAR, B., PATEL, T. & GILL, L. 2009. A comparative study on the treatment performance of a conventional septic tank system and reed bed-soil absorption system receiving domestic effluent. Desalination and Water Treatment, 4, 45-53.

PARNELL, J. 2009. Flora of Thailand 10 (1), 1-140pp+ XLIV plates. Eds. T. Santisuk, K. Larsen, M. Newman, K. Chayamarit, H.-J Esser, S. Hul, M. Kato, D. Middleton, H. Pedersen, J. Parnell, C. Phengkhlai & P.C. van Welzen. The Forest Herbarium, National Park, Wildlife and Conservation Department, (Editor).

PARNELL, J. 2009. W.H. Harvey. In Dictionary of Irish Biography. Volume 4, 513-514. Eds. McGuire, J. & Quinn, J. Cambridge University Press & Royal Irish Academy. Ca. 7,000pp.

PENDRY, C.A., PARNELL, J.A.N. & VAN WELZEN, P.C. 
2009. Biogeographic links between Thailand and Nepal and the potential for collaboration between their Flora projects. Thai Forest Bulletin, Special Issue, 169-185.

REDAELLI, M. & DYER, M. 2009. Discussion: A methodology for regional-scale flood risk assessment. Proceedings of the Institution of Civil Engineers-Water Management, 162, 347-347.

ROCHA, C., IBANHEZ, J. & LEOTE, C. 2009. Benthic nitrate biogeochemistry affected by tidal modulation of Submarine Groundwater Discharge (SGD) through a sandy beach face, Ria Formosa, Southwestern Iberia. Marine Chemistry, 115, 43-58.

ROCHE, J. R., MITCHELL, F. J. G. & WALDREN, S. 2009. Plant community ecology of Pinus sylvestris, an extirpated species reintroduced to Ireland. Biodiversity and Conservation, 18, 2185-2203.

SANTISUK, T., WILKIN, P., CHAYAMARIT, K., SIMPSON, D.A., PARNELL, J.A.N., MIDDLETON, D.J., VAN WELZEN, P., ESSER, H.-J., UTTERIDGE, T. & SANDERS, R. 2009. Thai Forest Bulletin, 37, 1–155. (Editor).

SANTISUK, T., WILKIN, P., CHAYAMARIT, K., SIMPSON, D.A., PARNELL, J.A.N., MIDDLETON, D.J., VAN WELZEN, P., ESSER, H.-J., UTTERIDGE, T. & SANDERS, R. 2009. Thai Forest Bulletin, Special Issue, 1-218. (Editor).

STOUT, J. C. & MORALES, C. L. 2009. Ecological impacts of invasive alien species on bees. Apidologie, 40, 388-409.

STYLES, D., O'BRIEN, K. & JONES, M. B. 2009. A quantitative integrated assessment of pollution prevention achieved by Integrated Pollution Prevention Control licensing. Environment International, 35, 1177-1187.

STYLES, D., O'BRIEN, P., O'BOYLE, S., CUNNINGHAM, P., DONLON, B. & JONES, M. B. 2009. Measuring the environmental performance of IPPC industry: I. Devising a quantitative science-based and policy-weighted Environmental Emissions Index. Environmental Science & Policy, 12, 226-242.

STYLES, D., O'LEARY, E. & JONES, M. B. 2009. Measuring the environmental performance of IPPC industry: II. Applying the Environmental Emissions Index to quantify environmental performance trends from routinely reported data. Environmental Science & Policy, 12, 243-256.

SULLEABHAIN, C. O., GILL, L. W., MISSTEAR, B. D. R. & JOHNSTON, P. M. 2009. Fate of endocrine-disrupting chemicals in percolating domestic wastewater effluent. Water and Environment Journal, 23, 110-118.

SUNGKAEW, S., STAPLETON, C., SALAMIN, N. & HODKINSON, T. 2009. Non-monophyly of the woody bamboos (Bambuseae; Poaceae): a multi-gene region phylogenetic analysis of Bambusoideae s.s. Journal of Plant Research, 122, 95-108.

TRIAS-BLASI, A., PARNELL, J.A.N. & CHAYAMARIT, K. 2009. Taxonomic notes on two Cissus (Vitaceae) species in Thailand. Thai Forest Bulletin, Special Issue, 205-211.

VILÀ, M., BARTOMEUS, I., DIETZSCH, A. C., PETANIDOU, T., STEFFAN-DEWENTER, I., STOUT, J. C. & TSCHEULIN, T. 2009. Invasive plant integration into native plant–pollinator networks across Europe. Proceedings of the Royal Society B: Biological Sciences, 276, 3887-3893.

For earlier publications, see PI webpages