Professor Trevor Hodkinson
Professor, Botany

Suwanphakdee C, Karapan S, Banchong Y, Hodkinson TR , Three new species, two new records and additional taxonomic notes of Piper (Piperaceae) from Thailand. , Nordic Journal of Botany, 2023, p1 - 19 Journal Article, 2023

Alwarnaidu Vijayarajan V, Morgan C, Onkokesung N, Cook, SK, Hodkinson TR, Barth S, Hennessy M, Forristal, PD , Characterization of Mesosulfuron-Methyl Iodosulfuron-Methyl and Pyroxsulam-Resistant Annual Bluegrass (Poa annua) in an Annual Cropping System., Weed Science, doi:10.1017/wsc.2023, 2023, 1, p23 Journal Article, 2023

Touafchia, S; Maurin, O; Boonsuk, B; Hodkinson, TR; Chantaranothai, P; Rakotomalala, N; Randrianarimanana, F; Randriamampianina, JA, Roy S; MacKinnon, L; Rakotoarinivo, M; Besnard, G; Haevermans, T; Vorontsova, MS, Evolutionary history, traits, and weediness in Digitaria (Poaceae: Panicoideae), Botanical Journal of the Linnean Society, (boad014), 2023 Journal Article, 2023 URL

Genetic variation of paclitaxel biosynthesis genes in yews (Taxus) and allies in, editor(s)Ramil-Rego P, Rodríguez Guitián MA, Ferreiro da Costa J, Gómez-Orellana L , Conservación y restauración de los bosques de tejo en Europa: 11-18. Monografías do Ibader, Serie Biodiversidade, Lugo., Galicia, Spain, Ibader, USC, 2023, pp341 - 351, [Coughlan P, Carolan JC, Hook IL ,Hodkinson TR] Book Chapter, 2023 URL

Sarapan A, Hodkinson TR, Suwanphakdee C, Assessment of Morphological, Anatomical and Palynological Variation in the Medicinal Plant Disporopsis longifolia Craib (Asparagaceae) for Botanical Quality Control, Plants, 12(2), 2023, p259- Journal Article, 2023 DOI

Suwanphakdee, C., Hodkinson, T. R., & Chantaranothai, P. , New species and a revision of the genus Peperomia (Piperaceae) in Thailand., Thai Forest Bulletin (Botany), 50, (2), 2022, p104 - 119 Journal Article, 2022 DOI

Byrne T, Farrelly N, Kelleher C, Hodkinson TR, Byrne SL, Barth S, Genetic diversity and structure of a diverse population of Picea sitchensis using genotyping-by-sequencing, Forests, 19, (9), 2022, p1511- Journal Article, 2022 URL DOI

Soldi, E, Tiley, A, O'Hanlon, R, Murphy, BR, & Hodkinson, TR, Ash Dieback and Other Pests and Pathogens of Fraxinus on the Island of Ireland, Biology and Environment: Proceedings of the Royal Irish Academy , 122, (2), 2022, p85-122 Journal Article, 2022 DOI

Soldi E, Fuller E, Tiley AMM, Murchie AK, Hodkinson TR, First Report of the Ash Sawfly, Tomostethus nigritus, Established on Fraxinus excelsior in the Republic of Ireland, Insects, 13, (1), 2022, p6- Journal Article, 2022 URL DOI

Høyer AK, Jørgensen HJL, Hodkinson TR, Jensen B. , Fungal Endophytes Isolated from Elymus repens, a Wild Relative of Barley, Have Potential for Biological Control of Fusarium culmorum and Pyrenophora teres in Barley. , Pathogens, 11, (10), 2022, p1097- Journal Article, 2022 DOI

Lahiri A, Murphy BR, Hodkinson TR, Assessing Genotypic and Environmental effects on endophyte communities of Fraxinus (Ash) using culture dependent and independent DNA sequencing., Journal of Fungi, 7, (7), 2021, p565- Journal Article, 2021 DOI URL

Høyer AK, Hodkinson TR. , Hidden Fungi: Combining Culture-Dependent and -Independent DNA Barcoding Reveals Inter-Plant Variation in Species Richness of Endophytic Root Fungi in Elymus repens. , Journal of Fungi, 7, (6), 2021, p466 Journal Article, 2021 DOI URL

Persistency, yield, and silage quality of Festulolium cultivars over a consecutive five-year period under a mild Atlantic climate in, editor(s)David Kopecký, Arkadiusz Kosmala , Festulolium from the Nature to Modern Breeding Festulolium from the Nature to Modern Breeding, Czech Republic, Palacký University Olomouc, 2021, pp89 - 108, [Curran N, D Grogan, D Milbourne, SL Byrne, E O'Riordan, M Hanley, J Grant,TR Hodkinson, S.Barth] Book Chapter, 2021 URL

McKeon-Bennett MMP, Hodkinson TR , Sphagnum moss as a novel growth medium in sustainable indoor agriculture systems, Current Opinion in Environmental Science & Health, 22, 2021, p100269 Journal Article, 2021 URL DOI

Mitros T, Session AM, James BT, Guohong A, Belaffif MB, Clark LV, Shu S, Dong H, Barling A, Holmes JR, Mattick JE, Bredeson JV, Liu S, Farrar K, Głowacka K, Jeżowski S, Barry K, Chae WB, Juvik JA, Gifford J, Oladeinde A,Yamada T, Grimwood J, Putnam NH,De Vega J, Barth S, Klaas M, Hodkinson TR, Li L, Jin X, Peng J, Yu CY,Heo K, Yoo JH, Ghimire BK, Donnison IS, Schmutz J, Hudson ME, Sacks EJ, Moose SP, Swaminathan K, Rokhsar DS, Genome biology of the paleotetraploid perennial biomass crop Miscanthus, Nature Communications, 11, (5442), 2020, p1 - 11 Journal Article, 2020 DOI

Coughlan P, Carolan, JC, Hook, ILI, Kilmartin, L, Hodkinson TR , Phylogenetics of Taxus Using the Internal Transcribed Spacers of Nuclear Ribosomal DNA and Plastid trnL-F Regions, Horticulturae, 6, 2020, p19- Journal Article, 2020 DOI

Annabel L. Smith, Trevor R. Hodkinson, Jesus Villellas, Jane A. Catford, Anna Mária Csergő, Simone P. Blomberg, Elizabeth E. Crone, Johan Ehrlén, Maria B. Garcia, Anna-Liisa Laine, Deborah A. Roach, Roberto Salguero-Gómez, Glenda M. Wardle, Dylan Z. Childs, Bret D. Elderd, Alain Finn, Sergi Munné-Bosch, Maude E. A. Baudraz, Judit Bódis, Francis Q. Brearley, Anna Bucharova, Christina M. Caruso, Richard P. Duncan, John M. Dwyer, Ben Gooden, Ronny Groenteman, Liv Norunn Hamre, Aveliina Helm, Ruth Kelly, Lauri Laanisto, Michele Lonati, Joslin L. Moore, Melanie Morales, Siri Lie Olsen, Meelis Pärtel, William K. Petry, Satu Ramula, Pil U. Rasmussen, Simone Ravetto Enri, Anna Roeder, Christiane Roscher, Marjo Saastamoinen, Ayco J. M. Tack, Joachim Paul Töpper, Gregory E. Vose, Elizabeth M. Wandrag, Astrid Wingler, Yvonne M. Buckley, Global gene flow releases invasive plants from environmental constraints on genetic diversity, Proceedings of the National Academy of Sciences, 117, (8), 2020, p4218 - 4227 Journal Article, 2020 DOI

Suwanphakdee C, Simpson DA, Hodkinson TR, Chantaranothai P , A synopsis of Thai Piper (Piperaceae), Thai Forest Bulletin (Botany), 48, (2), 2020, p145-183 Journal Article, 2020 DOI

Murphy BR, Hodkinson TR, Doohan F, 'Method for improving the mean dry shoot weight, mean dry grain weight, and suppressing seed-borne infection in a cereal crop', USA, US010765084B2, 2020, heProvost,Felows,Foundation Scholars & the Other Members of Board,oftheColegeoftheHoly& UndividedTrinityofQueenElizabeth, NearDublin,Dublin(IE);University ColegeDublin,NationalUniversityof Ireland,Dublin,Dublin(IE) Patent, 2020 URL

Curran N, Grogan D, Milbourne D, Byrne SL, O'Riordan E, Hanley M, Grant J, Hodkinson TR, Barth S , Persistency, yield, and silage quality of Festulolium cultivars over a consecutive five-year period under a mild Atlantic climate , Biologia Plantarum, 64, 2020, p856-864 Journal Article, 2020 DOI

Nansai S, Srisanga P, Hodkinson TR, Suwanphakdee C, Viola umphangensis (Violaceae), a new species from Thailand., Nordic Journal of Botany, 38, 2020, p1 - 4 Journal Article, 2020 DOI

Soldi E, Casey C, Murphy BR, Hodkinson TR., Fungal Endophytes for Grass Based Bioremediation: An Endophytic Consortium Isolated from Agrostis stolonifera Stimulates the Growth of Festuca arundinacea in Lead Contaminated Soil., Journal of Fungi, 6, (4), 2020, p254- Journal Article, 2020 DOI

Investigating the effect of seeding rate on forage grass sward composition. in, editor(s)Huguenin-Elie O, Studer B, Kölliker R, Reheul D, Probo M, Barre P, Feuerstein, Roldán-Ruiz I, Mariotte P, Hopkins A , Improving sown grasslands through breeding and management, Grassland Science in Europe, Volume 24, Wageningen, The Netherlands, Wageningen Academic Publishers, 2019, pp279 - [Curran N, Perdereau A, Barth S, Hodkinson TR, Byrne S, Milbourne D] Book Chapter, 2019 URL

Phueakkhlai O, Suddee S, Hodkinson TR, Sungkaew S, H Æ. Pedersen, A new species of Dendrobium (Orchidaceae: Epidendroideae: Malaxideae) described from previously perplexing specimens of the Seidenfaden collection, Phytotaxa, 419, (2), 2019, p197 - 202 Journal Article, 2019 URL DOI

Interaction of Epichloe infected forage grasses with fungal root endophytes in, editor(s)Huguenin-Elie O, Studer B, Kölliker R, Reheul D, Probo M, Barre P, Feuerstein, Roldán-Ruiz I, Mariotte P, Hopkins A , Improving sown grasslands through breeding and management, Grassland Science in Europe Volume 24, Wageningen, The Netherlands, Wageningen Academic Publishers, 2019, pp428 , [Hodkinson TR, Soldi E, Caradus JR, Johnson LJ, Murphy BR ] Book Chapter, 2019 URL

Emerging methods for biological control of barley diseases including the role of endophytes. in, editor(s)T. R. Hodkinson, F. M. Doohan, M. J. Saunders and B. R. Murphy. , Endophytes for a growing world, Cambridge, UK, Cambridge University Press, 2019, pp93 - 119, [Høyer, A. K., Jørgensen, H. J. L., Jensen, B., Murphy, B. R. and Hodkinson, T. R. ] Book Chapter, 2019 URL

Zhao, D., Parnell, J.A.N. & Hodkinson, T.R., Typification of names in Camellia (Theaceae), III., Phytotaxa, 415, 2019, p298 - 300 Journal Article, 2019

Sirimongkol, S., Parnell, J.A.N., Hodkinson, T, Middleton, D.J. & Puglisi, C. , Five new species of Henckelia (Gesneriaceae) from Myanmar and Thailand. , Thai Forest Bulletin, 47, 2019, p38 - 54 Journal Article, 2019 DOI

Hodkinson TR, Perdereau A, Klaas M, Cormican P, Barth S , Genotyping by sequencing and plastome analysis finds high genetic variability and geographical structure in Dactylis glomerata L. in Northwest Europe despite lack of ploidy variation, Agronomy, 9, (7), 2019, p342 Journal Article, 2019 DOI

Isolation, diversity and potential use of endophytes in the biomass and bioenergy crop Miscanthus. in, editor(s)T. R. Hodkinson, F. M. Doohan, M. J. Saunders and B. R. Murphy. , Endophytes for a growing world, Cambridge, UK, Cambridge University Press, 2019, pp188 - 207, [Beekwilder, J., Murphy, B. R., Mathuna, E. M.,Barry, A. and Hodkinson, T. R. ] Book Chapter, 2019 URL

Thammarong, W., Chantaranothai, P., Parnell, J., Hodkinson, T.R., Pornpongrungrueng, P. (2019)., Pollen morphology of Lecythidaceae in Southeast Asia. , Thai Forest Bulletin (Botany), 47, (1), 2019, p55 - 68 Journal Article, 2019 DOI

In vitro methods for plant-microbe interaction in, editor(s)T. R. Hodkinson, F. M. Doohan, M. J. Saunders and B. R. Murphy. , Endophytes for a growing world, Cambridge, UK, Cambridge University Press, 2019, [Lahiri, A., Douglas, G. C., Murphy, B. R. and Hodkinson, T. R. ] Book Chapter, 2019 URL

Endophytes for a growing world in, editor(s)T R. Hodkinson, F. M. Doohan, M. J. Saunders and B. R. Murphy. C , Endophytes for a growing world, Cambridge, UK, Cambridge University Press, 2019, pp1 - 22, [Hodkinson, T. R. and Murphy, B. R.] Book Chapter, 2019 URL

Pornpongrungrueng, P., Chantaranothai, P., Parnell, J.A.N. & Hodkinson, T.R. , Two new species of Phyllanthus (Phyllanthaceae) from Thailand., Phytokeys, 136, 2019, p35 - 44 Journal Article, 2019

BR Murphy, E Soldi, MJ Jadwiszczak, TR Hodkinson, Synergy between fungal endophytes improves fruit production in strawberry cultivar, Emergent Life Sciences Research, 5, (1), 2019, p29 - 41 Journal Article, 2019 DOI

Prospecting crop wild relatives for beneficial endophytes. in, editor(s)T. R. Hodkinson, F. M. Doohan, M. J. Saunders and B. R. Murphy. , Endophytes for a growing world, Cambridge, UK, Cambridge University Press, 2019, pp390 - 410, [Murphy, B. R., Doohan F. M and Hodkinson, T. R. ] Book Chapter, 2019 URL

T R. Hodkinson, F. M. Doohan, M. J. Saunders and B. R. Murphy, Endophytes for a growing world. , Cambridge University Press, 2019, 1 - 420pp Book, 2019 URL

Murphy, BR, Doohan, FM, Hodkinson TR, Matching source and sink: An environmentally tailored fungal endophyte consortium increases yield in three field-grown barley cultivars, Cogent Food & Agriculture, 4, 2018, p1 - 14 Journal Article, 2018 DOI URL

Murphy BR, Doohan, FM, Hodkinson TR, From Concept to Commerce: Developing a Successful Fungal Endophyte Inoculant for Agricultural Crops, Journal of Fungi, 4, (24), 2018, p1 - 11 Journal Article, 2018 TARA - Full Text URL

GenoGrass: a low cost, high throughput genotyping platform for perennial ryegrass in, editor(s)Horan, B, Hennessy, D, O'Donovan, M, Kennedy, E, McCarthy, B, Finn, JA, O'Brien, B , Sustainable meat and milk production from grasslands. Proceedings of the 27th General Meeting of the European Grassland Federation, 2018, pp842-844 , [Curran, N, Barth, S, Hodkinson, TR, Byrne, S, Milbourne, D] Book Chapter, 2018 URL

Phueakkhlai, O., Priwan Srisom, P., Suddee, S., Hodkinson, T. R., Srisom, P, Sungkaew, S, Dendrobium chrysocrepis (Orchidaceae), a new record for Thailand, Thai Forest Bulletin (Botany), 46, (2), 2018, p134 - 137 Journal Article, 2018 URL DOI URL

Suwanphakdee, C, Simpson, DA, Hodkinson, TR, Chantaranothai, P, Typification of Piper species (Piperaceae) in Southeast Asia, especially Thailand, Kew Bulletin, 73, 2018, p33- Journal Article, 2018 URL DOI

Arojju, SK, Conaghan, P, Barth, S, Milbourne, D, Casler, MD, Hodkinson, TR, Michel, T, Byrne, S, Genomic prediction of crown rust resistance in Lolium perenne, BMC Genetics, 19, 2018, p35- Journal Article, 2018 URL DOI

Hodkinson TR, Evolution and taxonomy of the grasses (Poaceae): a model family for the study of species-rich groups, Annual Plant Reviews, 1, 2018, p1 - 39 Journal Article, 2018 DOI URL

Sungkaew, S, Hodkinson, TR, Xia, N, Teerawatananon, A , Chimonocalamus auriculatus, one more new temperate woody bamboo species of the genus (Poaceae: Bambusoideae: Arundinarieae) described from Thailand, Phytotaxa, 357, (1), 2018, p66-70 Journal Article, 2018 URL DOI

Murphy BR & Hodkinson TR, Endophyte ecology, diversity and utilisation, Plant Ecology & Diversity, 11, (5-6), 2018, p551 - 554 Journal Article, 2018 URL

Murphy, B. R, Jadwiszczak, M. J., Soldi, E, Hodkinson, TR , Endophytes from the crop wild relative Hordeum secalinum L. improve agronomic traits in unstressed and salt-stressed barley, Cogent Food & Agriculture, 4, (1), 2018, p1 - 10 Journal Article, 2018 DOI

Zhao, D, Parnell, JAN, Hodkinson, TR, Typification of names in Camellia (Theaceae), II, Phytotaxa, 351, (1), 2018, p93-95 Journal Article, 2018 DOI URL

Positive plant-fungal interactions in, editor(s)K. J. Willis , State of the World's Fungi. Report., Royal Botanic Gardens, Kew., 2018, pp32 - 39, [Suz LM, Sarasan V, Wearn JA, Bidartondo, MI, Hodkinson, TR, Kowal J, Murphy, BR, Rodriguez RJ, Gange A] Book Chapter, 2018 URL

Pornpongrungrueng, P., Parnell, J.A.N., Hodkinson, T. & Chantaraonthai, P. , Phyllanthus kaweesakii (Phyllanthaceae), a new species from Thailand., Botany, 95, 2017, p567 - 577 Journal Article, 2017 DOI

Murphy BR, Doohan FM, Hodkinson TR, A seed dressing combining fungal endophyte spores and fungicides improves seedling survival and early growth in barley and oat, Symbiosis, 2017, p69 - 76 Journal Article, 2017 DOI URL

Zhao, D., Parnell, J.A.N., Hodkinson, T.R., Typification of names in the genus Camellia (Theaceae), Phytotaxa, 292, 2017, p171 - 179 Journal Article, 2017

Teerawatananon A, Marod D, Hodkinson TR, Sungkaew S, Chimonocalamus elegans, a new temperate woody bamboo species (Poaceae: Bambusoideae) from Doi Phu Kha National Park, Thailand, Phytotaxa, 302 , (1), 2017, p97 - 100 Journal Article, 2017 DOI

Zhao, D., Parnell, J.A.N. & Hodkinson, T. R., Names of Assam tea: Their priority, typification and nomenclatural notes. , Taxon, 66, 2017, p1447 - 1455 Journal Article, 2017 DOI

FitzGerald A, Hodkinson TR, The diploid Festuca ovina subsp. ovina (Poaceae) confirmed cytologically for Ireland, New Journal of Botany, 7 , 2017, p182-183 Journal Article, 2017 DOI

Suwanphakdee C, Simpson DA, Hodkinson TR, Chantaranothai P, Taxonomic notes on the genus Piper (Piperaceae), Nordic Journal of Botany, 34, (5), 2017, p605 - 618 Journal Article, 2017 DOI TARA - Full Text

Suwanphakdee, C., Hodkinson, T.R., Chantaranothai, P., New species and a reinstatement in Peperomia (Piperaceae) from Thailand, Kew Bulletin, 72, (1), 2017, p1 Journal Article, 2017 DOI

Delêtre, M., Hodkinson, T.R., McKey, D., Perceptual selection and the unconscious selection of `volunteer" seedlings in clonally propagated crops: an example with African cassava (Manihot esculenta Crantz) using ethnobotany and population genetics, Genetic Resources and Crop Evolution, 64, (4), 2017, p665-680 Journal Article, 2017 DOI

Murphy BR, Hodkinson TR, Doohand FM, A fungal endophyte consortium counterbalances the negative effects of reduced nitrogen input on the yield of field-grown spring barley, Journal of Agricultural Science, 155, (8), 2017, p1324-1331 Journal Article, 2017 DOI

Barth, S., McGrath, S.K., Arojju, S.K., Hodkinson, T.R., An Irish perennial ryegrass genetic resource collection clearly divides into two major gene pools, Plant Genetic Resources: Characterisation and Utilisation, 15, 2017, p269-278 Journal Article, 2017 DOI

Perdereau A, Klaas M, Barth S.and Hodkinson TR, Plastid genome sequencing reveals biogeographical structure and extensive population genetic variation in wild populations of Phalaris arundinacea L. in north-western Europe. , GCB Bioenergy, 9, (1), 2017, p46 - 56 Journal Article, 2017 TARA - Full Text DOI

Extent of Crown Rust Infection in a Perennial Ryegrass (Lolium perenne L.) Association Mapping Population. in, Roldán-Ruiz I, Baert J, Reheul D. , Switzerland. , Breeding in a World of Scarcity. Proceedings of the 2015 Meeting of the Section "Forage Crops and Amenity Grasses" of Eucarpia., Switzerland, Springer International Publishing, 2016, pp47 - 52, [Arojju SK, Milbourne D, Conaghan P, Hodkinson TR, Barth S] Book Chapter, 2016 DOI URL

Estep, M.C. and McKain, M.R. and Diaz, D.V. and Zhong, J. and Hodge, J.G. and Hodkinson, T.R. and Layton, D.J. and Malcomber, S.T. and Pasquet, R. and Kellogg, E.A., Erratum: Allopolyploidy, diversification, and the Miocene grassland expansion (Proceedings of the National Academy of Sciences of the United States of America (2015) 111 (15149-15154)), Proceedings of the National Academy of Sciences of the United States of America, 113, (2), 2016, pE257 Journal Article, 2016 DOI

Barth S, Jankowska MJ , Hodkinson TR, Vellani T and Klaas M, Variation in sequences containing microsatellite motifs in the perennial biomass and forage grass, Phalaris arundinacea (Poaceae), BMC Research Notes, (9), 2016, p184- Journal Article, 2016 TARA - Full Text URL

Mina-Vargas AM, McKeown PC, Flanagan NS, Debouck DG, Kilian A, Hodkinson TR, Spillane C, Origin of year-long bean (Phaseolus dumosus Macfady, Fabaceae) from reticulated hybridization events between multiple Phaseolus species, Annals of Botany, 2016, p957-969 Journal Article, 2016 DOI URL TARA - Full Text

Hodkinson, T.R. and Petrunenko, E. and Klaas, M. and MÃŒnnich, C. and Barth, S. and Shekhovtsov, S.V. and Peltek, S.E., New breeding collections of Miscanthus sinensis, M. Sacchariflorus and hybrids from primorsky krai, far eastern Russia, 2016, 105-118pp Book, 2016 DOI

McEvoy A, O'Regan, F, Fleming CC, Moreland BP, Pollock JA, McGuinness BW and Hodkinson TR, Bleeding canker of horse chestnut (Aesculus hippocastanum) in Ireland: incidence, severity and characterization using DNA sequences and real-time PCR, Plant Pathology, 2016 Journal Article, 2016 DOI

Boonsuk B, Chantaranothai P, Hodkinson TR, A taxonomic revision of the genus Digitaria (Panicoideae: Poaceae) in mainland Southeast Asia, Phytotaxa, 246, (4), 2016, p248 - 280 Journal Article, 2016 URL

Murphy BR, Doohan FM, Hodkinson TR, Supression of vertically transmitted infections of barley by fungal root endophytes is linked to the soil properties of the isolate origin, IOBC-WPRS Bulletin, 15, 2016, p31 - 36 Journal Article, 2016

Arojju SK, Barth S, Milbourne D, Conaghan P, Velmurugan J, Hodkinson TR, Byrne SL, Markers associated with heading and aftermath heading in perennial ryegrass full-sib families, BMC Plant Biology, 16, 2016, p1 - 16 Journal Article, 2016 URL TARA - Full Text DOI

Murphy BR, Nieto LM, Doohan FM, Hodkinson TR, Profundae diversitas: the uncharted genetic diversity in a newly studied group of fungal root endophytes, Mycology, 2015, 139-150 Journal Article, 2015 DOI

Murphy BR, Doohan FM, Hodkinson TR, Media Manipulations and the Culture of Beneficial Fungal Root Endophytes, International Journal of Biology, 7, 2015, p95 - 102 Journal Article, 2015 URL TARA - Full Text DOI

Murphy BR, Nieto LM, Doohan FM, Hodkinson TR, Fungal endophytes enhance agronomically important traits in severely drought-stressed barley, Journal of Agronomy and Crop Science, 201, (6), 2015, p419-427 Journal Article, 2015 DOI

Głowacka K, Clark LV , Adhikari S, Peng J , Stewart JR , Nishiwaki A, Yamada T, Jørgensen U, Hodkinson TR , GiffordJ , Juvik JA, Sacks EJ, Genetic variation in Miscanthus ×giganteus and the importance of estimating genetic distance thresholds for differentiating clones, GCB Bioenergy, 7, (2), 2015, p386-404 Journal Article, 2015 TARA - Full Text DOI

Jones MB, Finnan J, Hodkinson TR, Morphological and physiological traits for higher biomass production in perennial rhizomatous grasses grown on marginal land, GCB Bioenergy, 7, (2), 2015, p375-385 Journal Article, 2015 DOI

Murphy BR, Doohan FM, Hodkinson TR, Persistent fungal root endophytes isolated from a wild barley species suppress seed-borne infections in a barley cultivar, BioControl, 60, (2), 2015, p281-292 Journal Article, 2015 DOI

Murphy BR, Nieto LM, Doohan FM, Hodkinson TR, The Difference between Life and Death: Fungal Endophytes Improve Survival and Increase Biomass in Multiply-Stressed Barley., Global Journal of Science Frontier Research, 15, (5), 2015, p1 - 9 Journal Article, 2015 URL

Stout JC, Duffy KJ, Egan PA, Harbourne M, Hodkinson TR, Genetic diversity and floral width variation in introduced and native populations of a long-lived woody perennial., AoB PLANTS, 7, (plu087), 2015, p1 - 11 Journal Article, 2015 DOI

Hodkinson TR, Klaas M, Jones MB, Prickett R, Barth S, Miscanthus: a case study for the utilization of natural genetic variation, Plant Genetic Resources: Characterization and Utilization, 13, 2015, p219-237 Journal Article, 2015 DOI

Brian R. Murphy & Fiona M. Doohan & Trevor R. Hodkinson, Fungal root endophytes of a wild barley species increase yield in a nutrient-stressed barley cultivar, Symbiosis, 2015, 1-7 Journal Article, 2015 DOI

Murphy BR, Doohan FM, Hodkinson TR, Native fungal microorganisms enhance important agronomic traits in barley, TCD Journal of Postgraduate Research, 14, 2015, p20- Journal Article, 2015

Boonsuk B, Chantaranothai P, Hodkinson TR, A new species and two new taxon records of Digitaria (Poaceae: Panicoideae) for Thailand, Phytotaxa, 161, (4), 2014, p283 - 288 Journal Article, 2014 DOI URL

Estep M, McKain MR, Diaz DV, Zhong J, Hodge JG, Hodkinson TR, Layton D, Malcomber S, Pasqueth R, Kellogg EA , Allopolyploidy, diversification, and the Miocene grassland expansion, Proceedings of the National Academy of Sciences USA, Proceedings of the National Academy of Sciences USA, 11, edited by 42 , 2014, pp15149-15154 Conference Paper, 2014 DOI URL TARA - Full Text

Boonsuk B, Chantaranothai, P, Hodkinson TR, Digitaria isanensis sp. nov. and a reinstated taxon of Digitaria (Poaceae) from Thailand, Nordic Journal of Botany, 32, 2014, p811-814 Journal Article, 2014 DOI URL

Suwanphakdee C, TR Hodkinson, P Chantaranothai, New records of Peperomia (Piperaceae) in Thailand, THAI FOR. BULL. (BOT.) , 42, 2014, 61-67 Journal Article, 2014

Murphy BR, Doohan FM, Hodkinson TR, Yield increase induced by the fungal root endophyte Piriformospora indica in barley grown at low temperature is nutrient limited, Symbiosis, 62, 2014, p29-39 Journal Article, 2014 DOI

Brian Murphy, Fiona Doohan, Trevor Hodkinson, 'A method for improving the mean dry shoot weight and suppressing seed borne infection in a cereal crop', European Patent Office, EP14182893, 2014, Brian Murphy, Fiona Doohan, Trevor Hodkinson Patent, 2014 Other

McGrath S, Hodkinson TR, Frohlich A, Grant J, Barth S, Seasonal and genetic variations in water-soluble carbohydrates and other quality traits in ecotypes and cultivars of perennial ryegrass (Lolium perenne L.), Plant Genetic Resources: Characterization and Utilization, doi:10.1017/S1479262, 2014, p1 - 12 Journal Article, 2014 DOI

Perdereau AC, Kelleher CT, Douglas GC, Hodkinson TR, High levels of gene flow and genetic diversity in Irish populations of Salix caprea L. inferred from chloroplast and nuclear SSR markers, BMC Plant Biology, 14, 2014, p202- Journal Article, 2014 TARA - Full Text DOI URL

Teerawatananon, A., Boontia, V., Chantarasuwan, B., Hodkinson, T.R., Sungkaew, S. , A taxonomic revision of the genus Dimeria (Poaceae: Panicoideae) in Thailand, Phytotaxa, 186, (3), 2014, p137-147 Journal Article, 2014 DOI

Soh WK, von Sternburg M, Hodkinson TR, Parnell JAN, Buxus sirindhorniana sp. nov. (Buxaceae), a bicarpellate species from Thailand, Nordic Journal of Botany, 32, 2014, p452-458 Journal Article, 2014 DOI TARA - Full Text

Thomasset M, Hodkinson TR, Restoux, G, Frascaria-Lacoste N, Douglas GC, Fernandez-Manjarres, JF, Thank you for not flowering: conservation genetics and gene flow analysis of native and non-native populations of Fraxinus (Oleaceae) in Ireland, Heredity, 112, 2014, p596 - 606 Journal Article, 2014 TARA - Full Text DOI

Barth S, Jones M, Hodkinson TR, Finnan J, Klaas M, Wang Z-Y , Grasslands for forage and bioenergy use: traits and biotechnological implications, Grassland Science in Europe, 19, 2014, p438 - 449 Journal Article, 2014 URL

Jones MB, Finnan J, Hodkinson TR, Morphological and physiological traits for higher biomass production in perennial rhizomatous grasses grown on marginal land, GCB Bioenergy, 7, 2014, p375-385 Journal Article, 2014 DOI URL

Strijk JS, Bone RE, Thébaud C, Buerki S, Fritsch PW, Hodkinson TR, Strasberg D, Timing and tempo of evolutionary diversification in a biodiversity hotspot: Primulaceae on Indian Ocean islands, Journal of Biogeography, 41, 2014, p810 - 822 Journal Article, 2014 DOI

Murphy BR, Hodkinson TR & Doohan FM, Mechanisms of beneficial colonisation of barley by fungal root endophytes, Aspects of Applied Biology, 120, 2013, p35 - 44 Journal Article, 2013

First Insights into the Mitochondrial Genome of Perennial Ryegrass (Lolium perenne) in, editor(s)Bath S, Milbourne D , Breeding strategies for sustainable forage and turf grass improvement, 2013, pp141 - 145, [Diekmann K, Hodkinson TR, Wolfe KH, Barth S] Book Chapter, 2013 DOI URL

Christin P-A, Osborne CP, Chatelet DS, Columbus JT, Besnard G, Hodkinson TR, Garrison LM, Vorontsova MS, Edwards EJ, Anatomical enablers and the evolution of C4 photosynthesis in grasses, Proceedings of the National Academy of Sciences USA, 110, 2013, p1381-1386 Journal Article, 2013 DOI TARA - Full Text

Kelchner SA & The Bamboo Phylogeny Group: Clark L, Cortés G, Oliveira RP, Dransfield S, Filgueiras T, Fisher AE, Guala GF, Hodkinson TR, Judziewicz E, Kumar M, Li D-Z, Londoño X, Mejia MT, Santos-Gonçalves AP, Stapleton CMA, Sungkaew S, Triplett J, Widjaja E, Wong KM, Xia N-H, Higher level phylogenetic relationships within the bamboos (Poaceae: Bambusoideae) based on five plastid markers. Molecular Phylogenetics and Evolution, Molecular Phylogenetics and Evolution, 67, 2013, p404 - 413 Journal Article, 2013 DOI

Gallagher E, Douglas GC, Kelly DL, Barth S, Kelleher, CT, Hodkinson TR, Old age sex: a parentage study of different age cohorts in a native veteran pedunculate oak (Quercus robur L.) woodland using microsatellite markers, Biology and Environment - Proceedings of the Royal Irish Academy, 2013, p115-- Journal Article, 2013 DOI

Thomasset M, Fernández-Manjarrés JF, Douglas GC, Bertolino P, Frascaria-Lacoste N, Hodkinson TR, Assignment testing reveals multiple introduced source populations including potential ash hybrids (Fraxinus excelsior x F. angustifolia) in Ireland, European Journal of Forest Research, 132, 2013, p195 - 209 Journal Article, 2013 DOI

Parnell JAN, Pedersen HAE, Hodkinson TR, Balslev H, van Welzen PC, Simpson D, Middleton DJ, Esser H-J, Pooma R, Utteridge T, Staples G, Hybrids and the Flora of Thailand, Thai Forest Bulletin (Bot.), 41, 2013, p1 - 9 Journal Article, 2013 URL

Teerawatananon A, Sungkaew S, Marod D, Hodkinson TR , Studies in the recent new genus record Pseudostachyum (Poaceae: Bambusoideae) from Thailand: notes on its taxonomy, distribution and habitat, Nordic Journal of Botany, 32, 2013, p51-54 Journal Article, 2013 DOI TARA - Full Text

Murphy BR, Doohan FM, Hodkinson TR, Fungal endophytes of barley roots, The Journal of Agricultural Science, 152, (4), 2013, p602-615 Journal Article, 2013 DOI

Chaisongkrama W, Chantaranothai P & Hodkinson TR, A taxonomic revision of the genus Eragrostis (Poaceae) in Thailand, ScienceAsia, 39, 2013, p111 - 123 Journal Article, 2013 TARA - Full Text DOI

Perdereau AC, Douglas GC, Hodkinson TR, Kelleher CT, High levels of variation in Salix lignocellulose genes revealed using poplar genomic resources, Biotechnology for Biofuels, 6, 2013, p1 - 15 Journal Article, 2013 URL DOI TARA - Full Text

Teerawatananon A, Sungkaew S, Boontia V, Hodkinson TR, A taxonomic revision of Germainia (Andropogoneae: Poaceae) in Thailand, Blumea, 57, 2013, p221-228 Journal Article, 2013 DOI

Hodkinson TR, de Cesare M, Barth S, Nuclear SSR Markers for Miscanthus, Saccharum, and Related Grasses (Saccharinae, Poaceae), Applications in Plant Sciences, 1, (11), 2013 Journal Article, 2013 DOI

Teerawatananon A, Hodkinson TR, Sungkaew, S, Population Genetic Structure of Two Forest Grasses with Contrasting Life Forms, Arundinella setosa and Garnotia tenella in Thailand, Kasetsart Journal (Nat. Sci.), 47, 2013, p8 - 22 Journal Article, 2013 URL

Grass Phylogeny Working Group II: Aliscioni S, Bell HL, Besnard G, Christin PA, Columbus JT, Duvall MR, Edwards EJ, Giussani L, Hasenstab-Lehman K, Hilu KW, Hodkinson TR, Ingram AL, Kellogg EA, Mashayekhi S, Morrone O, Osborne CP,Salamin N, Schaefer H, Spriggs E, Smith SA, Zuloaga F, New grass phylogeny resolves deep evolutionary relationships and discovers C4 origins, New Phytologist, 193, 2012, p304 - 312 Journal Article, 2012 TARA - Full Text DOI

Donnelly A, Caffarra A, Kelleher CT, O'Neill BF, Diskin E, Pletsers A, Proctor H, Stirnemann R, O'Halloran J, Peñuelas J, Hodkinson TR, Sparks TH, Surviving in a warmer world: environmental and genetic responses, Climate Research, 53, 2012, p245 - 262 Journal Article, 2012 TARA - Full Text DOI

Diekmann K, Hodkinson TR, Barth S, New chloroplast microsatellite markers prove to be suitable for assessing genetic diversity of Lolium perenne and other related grass species, Annals of Botany, 110, 2012, p1327 - 1339 Journal Article, 2012 DOI TARA - Full Text

Trias-Blasi A, Parnell JAN, Hodkinson TR, Multi-gene region phylogenetic analysis of the grape family (Vitaceae), Systematic Botany, 37, 2012, p941 - 950 Journal Article, 2012 DOI

Hybridisation, introgression and climate change: a case study for the tree genus Fraxinus (Oleaceae) in, editor(s)Hodkinson, TR, Jones, MB, Waldren S, Parnell, JAN , Climate Change Ecology and Systematics. Systematics Association Special Series Volume 78., Cambridge, Cambridge University Press, 2011, pp320 - 342, [Thomasset, M, Fernández-Manjarrés JF, Douglas GC, Frascaria-Lacoste N & Hodkinson, TR] Book Chapter, 2011 URL

Teerawatananon A, Sungkaew S, TR Hodkinson, Arundinella kerrii and Dimeria kerrii, two new endemic species from Thailand (Poaceae, Panicoideae), Novon, 21, (1), 2011, p149 - 153 Journal Article, 2011 DOI URL

Hodkinson, T.R., Jones, M.B., Waldren, S. & Parnell, J.A.N., Climate Change, Ecology and Systematics, Cambridge, Cambridge University Press, 2011, 1 - 524pp Book, 2011

Hodkinson, TR, Jones, MB, Waldren S, Parnell, JAN, Climate Change, Ecology and Systematics. The Systematics Association Special Series Volume 78, Cambridge University Press, 2011, 524 + IXpp Book, 2011 URL

Integrating ecology and systematics in climate change research in, editor(s)Hodkinson, TR, Jones, MB, Waldren S, Parnell, JAN , Climate Change Ecology and Systematics, Systematics Association Special Series Volume 78, Cambridge, Cambridge University Press, 2011, pp3 - 43, [Hodkinson, TR] Book Chapter, 2011 URL

Savanna biome evolution, climate change and the ecological expansion of C4 grasses in, editor(s)Hodkinson, TR, Jones, MB, Waldren S, Parnell, JAN , Climate Change Ecology and Systematics. Systematics Association Special Series Volume 78, Cambridge, Cambridge University Press, 2011, [Bouchenak-Khelladi Y & Hodkinson TR] Book Chapter, 2011 URL

Thomasset M, Fernández-Manjarrés JF, Douglas GC, Frascaria- Lacoste N, Raquin C, Hodkinson TR, Molecular and morphological characterization of reciprocal F1 hybrid ash (Fraxinus excelsior x Fraxinus angustifolia, Oleaceae) and parental species reveals asymmetric character inheritance, International Journal of Plant Sciences, 172, (3), 2011, p423 - 433 Journal Article, 2011 DOI

Delêtre M, McKey DB, Hodkinson TR, Marriage exchanges, seed exchanges, and the dynamics of manioc diversity, Proceedings of the National Academy of Sciences USA, 108, (45), 2011, p18249-18254 Journal Article, 2011 TARA - Full Text

Teerawatananon A, Jacobs SWL and Hodkinson TR, Phylogenetics of Panicoideae (Poaceae) based on chloroplast and nuclear DNA sequences, Telopea, 13, 2011, p115 - 142 Journal Article, 2011 URL

TR Hodkinson, G Ní Chonghaile, S Sungkaew, MW Chase, N Salamin, CMA Stapleton, Phylogenetic analyses of plastid and nuclear DNA sequences indicate a rapid late Miocene radiation of the temperate bamboo tribe Arundinarieae (Poaceae, Bambusoideae), Plant Ecology and Diversity, 3, 2010, p109 - 120 Journal Article, 2010 DOI URL

Phylogenetics of Dendrocalamus (Poaceae: Bambusoideae, Bambuseae, Bambusinae) and its Related Genera Based on Combined Multi-gene Analyses in, editor(s)O Seberg, G Petersen, A Barfod, JI Davis , Diversity, Phylogeny, and Evolution in the Monocotyledons, Denmark, Aaarhus University Press, 2010, [S Sungkaew, CMA Stapleton, TR Hodkinson] Book Chapter, 2010 URL

The Complete Chloroplast Genome Sequence of Perennial Ryegrass (Lolium perenne L.) Reveals Useful Polymorphisms Among European Ecotypes in, editor(s)Huyghe C , Sustainable use of Genetic Diversity in Forage and Turf Breeding, Netherlands, Springer , 2010, pp409 - 413, [Diekmann K, Hodkinson TR, Wolfe KH, Bekerom R, Dix, PJ, Barth S] Book Chapter, 2010 DOI

Diversification of the Grasses (Poaceae): a Phylogenetic Approach to Reveal Macro-Evolutionary Patterns. in, editor(s)O Seberg, G Petersen, A Barfod, JI Davis , Diversity, Phylogeny, and Evolution in the Monocotyledons , Denmark, Aaarhus University Press., 2010, pp451 - 475, [Bouchenak-Khelladi Y, Savolainen V, Hodkinson TR] Book Chapter, 2010 URL

de Cesare M, Hodkinson TR, Barth S, Chloroplast DNA markers (cpSSRs, SNPs) for Miscanthus, Saccharum and related grasses (Panicoideae, Poaceae), Molecular Breeding, 26, (3), 2010, p539 - 544 Journal Article, 2010 DOI URL

Kelleher CT, Hodkinson TR, Kelly DL, Douglas GC, Genetic analysis reveals four Irish oak genotypes, Coford Connects, 2010, 2010 Journal Article, 2010

McGrath S, Hodkinson TR, Charles TM, Zen DG, Barth S, Variation in inflorescence characters and inflorescence development in ecotypes and cultivars of Lolium perenne L., Grass and Forage Science, 65, 2010, p398 - 409 Journal Article, 2010 DOI

Relationships between Phuphanochloa (Bambuseae, Bambusoideae, Poaceae) and its related genera in, VIII World Bamboo Congress Proceedings Vol 5, 2010, pp55 - 63, [Sungkaew S, Teerawatananon A, Hodkinson TR] Book Chapter, 2010 URL

Bouchenak-Khelladi Y, Verboom, GA, Savolainen, V, Hodkinson, TR, Biogeography of the Grasses (Poaceae): a Phylogenetic Approach to reveal Evolutionary History in Geographical Space and Geological Time, Botanical Journal of the Linnean Society, 162, 2010, p543 - 557 Journal Article, 2010 URL DOI

Teerawatananon A, Sungkaew S, Boontia V, TR Hodkinson, A synopsis of Thai Apocopis Nees (Poaceae, Panicoideae), Thai Forest Bulletin (Bot.), 38, 2010, p150 - 159 Journal Article, 2010 URL

de Cesare M, Hodkinson TR, Barth S, Phylogenetic analyses and ploidy variation in the biomass crop Miscanthus, Agricultural Research Forum, 2009, 2009, p125 - 126 Journal Article, 2009 URL

Teerawatananon A, Sungkaew S, Hodkinson TR, Arundinella kokutensis (Poaceae, Arundinelleae), a new species from south-eastern Thailand, Kew Bulletin, 64, (4), 2009, p747 - 750 Journal Article, 2009 URL DOI

Diekmann, K, Hodkinson TR, Wolfe K, Bekerom van den, R, Dix P, Barth S, Complete chloroplast genome sequence of a major allogamous forage species, perennial ryegrass (Lolium perenne L.), DNA Research, 16, (3), 2009, p165 - 176 Journal Article, 2009 DOI

Thomasset M, Hodkinson TR, Douglas DC, Assessing the potential for introgression of imported ash with native ash Fraxinus excelsior L.), Agricultural Research Forum, 2009, 2009, p135 - 136 Journal Article, 2009 URL

Bouchenak-Khelladi Y, Verboom GA, Hodkinson TR, Salamin N, Francois O, Ni Chonghaile G, Savolainen V , Origins and diversification of C4 grasses and savanna adapted ungulates, Global Change Biology, 15, (10), 2009, p2397 - 2417 Journal Article, 2009 DOI

Sungkaew S, Stapleton CMA, Salamin N, & Hodkinson TR, Non-monophyly of the woody bamboos (Bambuseae; Poaceae): a multi-gene region phylogenetic analysis of Bambusoideae s.s., Journal of Plant Research, 122, 2009, p95 - 108 Journal Article, 2009 DOI

Stapleton CMA, G Ní Chonghaile, Hodkinson TR, Molecular phylogeny of Asian woody bamboos: review for the Flora of China, Bamboo Science and Culture: The Journal of the American Bamboo Society, 22 , (1), 2009, p5 - 25 Journal Article, 2009

Diekmann K, Hodkinson TR, Fricke E, Barth S, An optimized chloroplast DNA extraction protocol for grasses (Poaceae) proves suitable for whole plastid genome sequencing and SNP detection, PLoS ONE, 3, (7), 2008, pe281 - e281 Journal Article, 2008 DOI TARA - Full Text

Christin P-A, Besnard G, Samaritani E, Duvall MR, Hodkinson TR, Savolainen V, Salamin N, Oligocene CO2 Decline Promoted C4 Photosynthesis in Grasses , Current Biology, 189, 2008, p37 - 43 Journal Article, 2008 DOI TARA - Full Text

Teerawatananon A, Hodkinson TR, Jansenella griffithiana (Mull.Hal) Bor (Gramineae/Poaceae): a new record for Thailand and notes on its typification, Thai Forest Bulletin (Bot.), 36, 2008, p109 - 113 Journal Article, 2008 URL

Bouchenak-Khelladi Y, Salamin N, Savolainen V, Forest F, van der Bank M, Chase MW, Hodkinson TR, Large multi-gene phylogenetic trees of the grasses (Poaceae): progress towards complete tribal and generic level sampling, Molecular Phylogenetics and Evolution, 47, 2008, p488 - 505 Journal Article, 2008 DOI

Miscanthus: Genetic Resources and Breeding Potential to Enhance Bioenergy Production in, editor(s)W. Vermerris , Genetic Improvement of Bioenergy Crops, New York, Springer, 2008, pp295 - 308, [Clifton-Brown J, Chiang Y-C, & Hodkinson TR] Book Chapter, 2008 DOI

Sungkaew S, Teerawatananon A, Parnell JAN, Stapleton CMA & Hodkinson TR, Phuphanochloa, a new bamboo genus (Poaceae: Bambusoideae) from Thailand, Kew Bulletin, 63, 2008, p669 - 673 Journal Article, 2008 URL

Sungkaew S, Hodkinson TR, Classification of bamboos (Poaceae; Bambusoideae) in Thailand inferred from a multi-gene region phylogenetic analysis, Journal of Tropical Plants Research, 1, 2008, p40 - 49 Journal Article, 2008

Diekmann K, Hodkinson TR, Barth S , Features of the complete chloroplast genome of perennial ryegrass (Lolium perenne L.), Proceedings of the Agricultural Research Forum , 2008, pp138 - 139 Conference Paper, 2008 URL

Simpson DA, AM. Muasya, M Alves, JJ Bruhl, S Dhooge, MW Chase, CA Furness, K Ghamkhar, P Goetghebeur, TR Hodkinson, AD Marchant, AA Reznicek, R Niewborg, EH Roalson, E Smets, JR Star, WW Thomas, KL Wlison, X Zhang, Phylogeny of Cyperaceae based on DNA sequence data - a new rbcL analysis, Aliso, 23, 2007, p72 - 83 Journal Article, 2007 URL

Hodkinson TR, Parnell JAN , Reconstructing the tree of life: taxonomy and systematics of species rich taxa. Systematics Association Special Series Volume 72 , Boca Raton, FL, USA, Taylor and Francis, CRC Press,, 2007, 1 - 351pp Book, 2007 URL

Hodkinson TR, Salamin N, Chase MW, Bouchenak-Khelladi Y , Renvoize SA, Savolainen V, Large trees, supertrees and diversification of the grass family, Aliso, 23, 2007, p248 - 258 Journal Article, 2007 URL

Hodkinson, TR, Waldren S, Parnell, JAN, Kelleher, CT, Salamin, K, Salamin, N, DNA banking for plant breeding, biotechnology and biodiversity evaluation, Journal of Plant Research, 120, (1), 2007, p17 - 29 Journal Article, 2007 DOI

Sungkaew, S., Teerwatananon, A., Parnell, J.A.N., Dransfield, S., Stapleton, C.M.A. & Hodkinson, T. , Dendrocalamus khoonmengii, a new bamboo species (Poaceae: Bambusoideae) from Peninsular Thailand., Thai Forest Bulletin, 35, 2007, p98 - 102 Journal Article, 2007 URL

Supersizing: Progress in Documenting and Understanding Grass Species Richness in, editor(s)Hodkinson TR, Parnell JAN , Reconstructing the tree of life: taxonomy and systematics of species rich taxa, Systematics Association Special Series Volume 72, Boca Raton, FL, USA, Taylor and Francis, CRC Press, 2007, pp279 - 298, [Hodkinson, TR, Savolainen V, Jacobs SWL, Bouchenak-Khelladi Y, Kinney MS, Savolainen V, Salamin N ] Book Chapter, 2007 URL

Sungkaew S, Teerawatananon A, Korawat W, Hodkinson TR, Dendrocalamus copelandii (Poaceae: Bambusoideae), Thai Forest Bulletin (Bot.), 35, 2007, p94 - 97 Journal Article, 2007 URL

Jones E, Simpson DA, Hodkinson TR, Chase MW, Parnell, JAN, The Juncaeae-Cyperaceae interface: a combined plastid sequence analysis, Aliso, 23, 2007, p55 - 61 Journal Article, 2007 URL

Variation in seed yield related and other morphological traits in a collection of Irish Lolium perenne ecotypes and bred varieties, in, editor(s)Lübberstedt T, Studer B, Graugaard S , Improvement of fodder crops and amenity grasses, Proceedings of the XXVIIth Eucarpia symposium, Copenhagen, Denmark, Eucarpia, 2007, pp22 - 27, [Barth S, McGrath S, Charles MT, Zen D & Hodkinson TR] Book Chapter, 2007

McGrath S, Hodkinson TR, Barth S, Extremely high cytoplasmic diversity in natural and breeding populations of Lolium (Poaceae), Heredity, 99, 2007, p531 - 554 Journal Article, 2007 DOI

Introduction to the Systematics of Species Rich Groups in, editor(s)Hodkinson TR, Parnell JAN , Reconstructing the tree of life: taxonomy and systematics of species rich taxa. Systematics Association Special Series Volume 72, Boca Raton, FL, USA, Taylor and Francis, CRC Press, 2007, pp3 - 20, [Hodkinson TR, Parnell JAN ] Book Chapter, 2007 URL

Flannery ML, Mitchell FJG, Coyne S, Kavanagh TA, Burke JI , Salamin N, Dowding P, Hodkinson TR, Plastid genome characterisation in Brassica and Brassicaceae using a new set of nine SSRs, Theoretical and Applied Genetics, 113, (7), 2006, p1221 - 1231 Journal Article, 2006 DOI

The Bamboo Phylogeny Group (Clark LG, Cortes G, Dransfield S, Filgueiras TS, Guala GF, Hodkinson TR, Judziewicz E, Kelchner S, Kumar M, Li D-H, Londona X, Mejia MT, Santos-Goncalves AP, Stapleton C, Triplett J, Widjaja E, Wong KM, Xia N-H), The bamboo phylogeny project, Bamboo, 27, (6), 2006, p11 - 14 Journal Article, 2006

McGrath S, Hodkinson TR, Salamin N, Barth S , Development and testing of novel chloroplast microsatellite markers for Lolium perenne and other grasses (Poaceae) from de novo sequencing and in silico sequences. , Molecular Ecology Notes , 6, 2006, p449 - 452 Journal Article, 2006 DOI

Carolan JC, Hook ILI, Chase MW, Kadereit JW, Hodkinson TR , Phylogenetics of Papaver and related genera based on DNA sequences from ITS nuclear ribosomal DNA and plastid trnL intron and trnL-F intergenic spacers, Annals of Botany , 98, 2006, p141 - 155 Journal Article, 2006 DOI

Carolan, J.C., Hook, I.L.I., Chase, M.W., Kadereit, J.W., Hodkinson, T.R, Phylogenetics of Papaver and Related Genera Based on DNA Sequences from ITS Nuclear Ribosomal DNA and Plastid trnL Intron and trnL-F Intergenic Spacers, Annals of Botany, 98, (1), 2006, p141 - 155 Journal Article, 2006 DOI

Harbourne, ME, Douglas GC, Waldren S, Hodkinson TR , Characterization and primer development for amplification of chloroplast microsatellite regions of Fraxinus excelsior, Journal of Plant Research , 118, 2005, p339 - 341 Journal Article, 2005 DOI

Salamin N, Hodkinson TR, Savolainen V, Towards building the tree of life: a simulation study for all angiosperm genera, Systematic Biology, 54, (2), 2005, p183 - 196 Journal Article, 2005 DOI

McGrath, S, Hodkinson, TR, & Barth, S, Development and testing of novel chloroplast markers for perennial ryegrass from de novo sequencing and in silico sequences, Proceedings of the Molecular Breeding for the Genetic Improvement of Forage Crops and turf, a satellite workshop of the XX International Grassland Congress, Aberystwyth, 2005, edited by M. Humphreys , Wageningen Academic Publishers, The Netherlands, 2005, pp200 Conference Paper, 2005

McGrath, S, Barth, S, Frohlich, A, Francioso, M Lamorte SA & Hodkinson TR, Variability in quantitiy and composition of water soluble carbohydrates among Irish accessions and European varieties of perennial ryegrass, XX International Grassland Congress, Dublin, 2005, edited by O'Mara FP, Wilkins RJ, Mannetje L.'t, Lovett DK, Rogers PAM, Boland TM , Wageningen Academic Publishers, The Netherlands, 2005, pp126 Conference Paper, 2005

Kelleher, CT, Hodkinson TR, Douglas GC, Kelly DL , Species distinction in Irish populations of Quercus petraea and Quercus robur: morphological versus molecular analyses. , Annals of Botany , 96, 2005, p1237 - 1246 Journal Article, 2005 DOI

Stapleton CMA, Ní Chonghaile G, Hodkinson TR, Sarocalamus, a new Sino-Himalayan bamboo genus (Poaceae: Bambusoideae), Novon, 14, 2004, p245 - 349 Journal Article, 2004 URL

Kelleher CT, Kelly DL, Hodkinson TR, Species status, hybridisation and geographic distribution of Irish populations of Quercus petraea (Matt.) Liebl. and Q. robur L., Watsonia, 25, 2004, p83 - 97 Journal Article, 2004 URL

Kelleher CT, Hodkinson TR, Kelly DL, Douglas GC, Characterisation of chloroplast DNA haplotypes to reveal the provenance and genetic structure of oaks in Ireland, Forest Ecology and Management, 189, 2004, p123 - 131 Journal Article, 2004 DOI

Harbourne M, Hodkinson TR, Waldren S, Douglas GC, The genetic characterisation of European common ash (Fraxinus excelsior L.) in Irish populations, Agricultural Research Forum, 2003, pp65 Conference Paper, 2003 URL

Abbott J, Douglas GC, Hodkinson TR, Improving the efficiency in vegetative propagation of selected mature Irish ash trees (Fraxinus excelsior L.) for farm forestry, Agricultural Research Forum, 2003, pp63 Conference Paper, 2003 URL

Simpson DA, Furness CA, Hodkinson TR, Muthama Muasya A, Chase MW, Phylogenetic relationships in Cyperaceae subfamily Mapanioideae inferred from pollen and plastid DNA sequence data, American Journal of Botany, 90, 2003, p1071 - 1086 Journal Article, 2003 URL

Salamin N., Chase MW, Hodkinson TR, Savolainen V, Assessing internal support with large phylogenetic DNA matrix, Molecular Phylogenetics and Evolution, 27, 2003, p528 - 539 Journal Article, 2003 DOI

Hodkinson TR, Chase MW, Renvoize SA, Characterization of a genetic resource collection for Miscanthus (Saccharinae, Andropogoneae, Poaceae) using AFLP and ISSR PCR, Annals of Botany, 89, 2002, p627 - 636 Journal Article, 2002 DOI

Hodkinson TR, Chase MW, Takahashi C, Leitch IJ, Bennett MD, Renvoize SA, The use of DNA sequencing (ITS and trnL-F), AFLP and fluorescent in-situ hybridisation to study allopolyploid Miscanthus (Poaceae), American Journal of Botany, 89, 2002, p279 - 286 Journal Article, 2002 URL

Hodkinson TR, Chase MW, Lledo D, Salamin N, Renvoize SA, Phylogenetics of Miscanthus s.l., Saccharum and related genera (Saccharinae, Andropogoneae, Poaceae) using DNA sequences from the ITS nuclear ribosomal DNA and the plastid trnL-F regions, Journal of Plant Research, 115, 2002, p381 - 392 Journal Article, 2002 DOI

Carolan ,J.C., Hook, I.L.I., Walsh, J.J., Hodkinson, T.R., Using AFLP markers for species differentiation and assessment of genetic variability of in vitro cultured Papaver bracteatum (Section Oxytona'), Vitro Cellular and Developmental Biology - Plant, 38, (3), 2002, p300-307 Journal Article, 2002 DOI

Meade CV, Hodkinson TR, Chalermglin P, Chase MW, Parnell JA, Revision of Uvaria L. in Continental Southeast Asia: 2. Floral character Evolution in the Uvaria L. Group, Annonaceae Newsletter, 13, 2002, p29 - 32 Journal Article, 2002

Carolan JC, Hook IL, Walsh JJ, Hodkinson TR, Using AFLP for species differentiation and assessment of in vitro cultured Papaver bracteatum (section Oxytona), In Vitro Cell Development - Plant, 38, 2002, p300 - 307 Journal Article, 2002 DOI

Salamin N, Hodkinson TR, Savolainen V, Building supertrees: an empirical assessment using the grass family (Poaceae), Systematic Biology, 51, 2002, p134 - 150 Journal Article, 2002 DOI

Hodkinson TR, Chase MW, Renvoize SA, Genetic resources of Miscanthus, Aspects of Applied Biology, 65, 2001, p239 - 248 Journal Article, 2001 URL

Scally L, Waldren S, Hodkinson TR, Jones MB, Molecular and morphological studies in Miscanthus, Aspects of Applied Biology, 65, 2001, p231 - 237 Journal Article, 2001

Origins and taxonomy of Miscanthus in, editor(s)Jones MB and Walsh M , Miscanthus - for Energy and Fibre, UK, James and James, 2001, pp1 - 9, [Scally L, Hodkinson TR, Jones MB] Book Chapter, 2001

Hodkinson TR, Renvoize SA, Nomenclature of Miscanthus xgiganteus, Kew Bulletin, 56, 2001, p757 - 758 Journal Article, 2001 URL

Martin J, Douglas G, Hodkinson TR, Kelleher C, Kelly DL, Analysing Irish oaks by chloroplast DNA analysis, Biofor, Proceedings of Application of Biotechnology to Forest Genetics, 99, 2000, pp134 - 138 Conference Paper, 2000

Hodkinson TR, Renvoize SA, Ní Chonghaile G, Stapleton CMA, Chase MW, A comparison of ITS nuclear rDNA sequence data and AFLP markers for phylogenetic studies in Phyllostachys (Bambusoideae, Poaceae), Journal of Plant Research, 113, 2000, p259 - 269 Journal Article, 2000 DOI

Reeves G, Francis D, Davies MS, Rogers HJ, Hodkinson TR, Genome size is negatively correlated with altitude in natural populations of Dactylis glomerata, Annals of Botany, 82, 1998, p99 - 105 Journal Article, 1998 URL

Hodkinson TR, Renvoize SA, Chase MW, Molecular systematics of Miscanthus, Aspects of Applied Biology, 49, 1997, p189 - 198 Journal Article, 1997 URL

The classification of Phyllostachys (Poaceae) in, editor(s)Chapman GP , The Bamboos. Linnaean Society Symposium Series 19, 1997, pp95 - 106, [Renvoize SA, Hodkinson TR] Book Chapter, 1997 URL